RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 KCNJ9Q92806 393 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 SMAD5Q99717 465 aaKnown RBP17.66■□□□□ 0.42
NUP50-207ENST00000424634 DPH7Q9BTV6 452 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 DDX47Q9H0S4 455 aaKnown RBP17.66■□□□□ 0.42
NUP50-207ENST00000424634 GPR83Q9NYM4 423 aa17.66■□□□□ 0.42
NUP50-207ENST00000424634 ZC3H7BQ9UGR2 993 aaKnown RBP17.66■□□□□ 0.42
NUP50-207ENST00000424634 USP9XQ93008 2570 aaPredicted RBP17.66■□□□□ 0.42
NUP50-207ENST00000424634 NUP210LQ5VU65 1888 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 HYKKA2RU49 373 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 USP27XA6NNY8 438 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 TTLL8A6PVC2 850 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 CYSRT1A8MQ03 144 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 GFYI3L273 518 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 BANF1O75531 89 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 SORBS2O94875 1100 aaKnown RBP17.65■□□□□ 0.42
NUP50-207ENST00000424634 ALBP02768 609 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 IVDP26440 423 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 CMPK1P30085 196 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 PNLIPRP1P54315 467 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 TIAL1Q01085 375 aaKnown RBP eCLIP17.65■□□□□ 0.42
NUP50-207ENST00000424634 ARHGAP19Q14CB8 494 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 PPP1R7Q15435 360 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 NKG7Q16617 165 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 MSS51Q4VC12 460 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 TTC29Q8NA56 475 aaPredicted RBP17.65■□□□□ 0.42
NUP50-207ENST00000424634 Q8NA96 180 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.65■□□□□ 0.42
NUP50-207ENST00000424634 PPFIBP2Q8ND30 876 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 CD200R1Q8TD46 325 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 ZNF480Q8WV37 535 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 SMPDL3AQ92484 453 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 INPP5DQ92835 1189 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 FKBP10Q96AY3 582 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 FER1L6-AS2Q96M78 137 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 SPSB2Q99619 263 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 GPR21Q99679 349 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 MFRPQ9BY79 579 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 SLC26A1Q9H2B4 701 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 FAM114A2Q9NRY5 505 aa17.65■□□□□ 0.42
NUP50-207ENST00000424634 IARS2Q9NSE4 1012 aaKnown RBP17.65■□□□□ 0.42
NUP50-207ENST00000424634 GOLGA6L10A0A0M3HER8 536 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 CLEC18AA5D8T8 446 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 E7ENX8 843 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 PEX12O00623 359 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 DNALI1O14645 258 aaPredicted RBP17.64■□□□□ 0.41
NUP50-207ENST00000424634 SLC16A8O95907 504 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 CATP04040 527 aaKnown RBP17.64■□□□□ 0.41
NUP50-207ENST00000424634 MPC1LP0DKB6 136 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 GABRB3P28472 473 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 TAP2Q03519 686 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 DHX9Q08211 1270 aaKnown RBP17.64■□□□□ 0.41
NUP50-207ENST00000424634 FAM214AQ32MH5 1076 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 TTLL9Q3SXZ7 439 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 JMJD6Q6NYC1 403 aaPredicted RBP17.64■□□□□ 0.41
NUP50-207ENST00000424634 CLEC18BQ6UXF7 455 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 SHISA6Q6ZSJ9 500 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 PAQR7Q86WK9 346 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 IGDCC3Q8IVU1 814 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 LMNTD2Q8IXW0 634 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 LRRC56Q8IYG6 542 aaPredicted RBP17.64■□□□□ 0.41
NUP50-207ENST00000424634 GALNT16Q8N428 558 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 CLEC18CQ8NCF0 446 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 FBXO15Q8NCQ5 510 aaPredicted RBP17.64■□□□□ 0.41
NUP50-207ENST00000424634 PLCD4Q9BRC7 762 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 AARSD1Q9BTE6 412 aaKnown RBP17.64■□□□□ 0.41
NUP50-207ENST00000424634 CCDC68Q9H2F9 335 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 WDR54Q9H977 334 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 MRPS30Q9NP92 439 aaKnown RBP17.64■□□□□ 0.41
NUP50-207ENST00000424634 CTSFQ9UBX1 484 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 MAU2Q9Y6X3 613 aa17.64■□□□□ 0.41
NUP50-207ENST00000424634 VSTM2BA6NLU5 285 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 H0YGG7 62 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 DPM1O60762 260 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 EIF2S1P05198 315 aaKnown RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 ERVK-10P10266 1014 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 PIM1P11309 404 aaPredicted RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 MMP11P24347 488 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 RPA3P35244 121 aaPredicted RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 ARF3P61204 181 aaPredicted RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 PRDX1Q06830 199 aaKnown RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 TSTA3Q13630 321 aaPredicted RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 PTK6Q13882 451 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 UBAP2LQ14157 1087 aaKnown RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 CRYMQ14894 314 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 PRTGQ2VWP7 1150 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 ZNF425Q6IV72 752 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 PIWIL4Q7Z3Z4 852 aaKnown RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 KCNMB4Q86W47 210 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 CPNE9Q8IYJ1 553 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 C2CD4AQ8NCU7 369 aaPredicted RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 CPT1CQ8TCG5 803 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 CALML6Q8TD86 181 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 SLCO2A1Q92959 643 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 EBNA1BP2Q99848 306 aaKnown RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 ZFYVE21Q9BQ24 234 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 SOX17Q9H6I2 414 aaPredicted RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 ZNF552Q9H707 407 aaPredicted RBP17.63■□□□□ 0.41
NUP50-207ENST00000424634 PLAC1Q9HBJ0 212 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 LUZP4Q9P127 313 aa17.63■□□□□ 0.41
NUP50-207ENST00000424634 ASIC3Q9UHC3 531 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms