RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SLC12A8A0AV02 714 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 GRXCR2A6NFK2 248 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 M0QX08 132 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 SSX4O60224 188 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 SCELO95171 688 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 PGLSO95336 258 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 CXCL14O95715 111 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 EFEMP2O95967 443 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 DBTP11182 482 aaKnown RBP13.96□□□□□ -0.18
MSH5-206ENST00000423982 HOXA9P31269 272 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 PPM1AP35813 382 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 BMPR1AP36894 532 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 TAF10Q12962 218 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 FBXO32Q969P5 355 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 ZNF566Q969W8 418 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 PYURFQ96I23 114 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 FUBP3Q96I24 572 aaKnown RBP eCLIP13.96□□□□□ -0.18
MSH5-206ENST00000423982 ZBTB18Q99592 522 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 DCSTAMPQ9H295 470 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 PDFQ9HBH1 243 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 QPCTLQ9NXS2 382 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 OPTCQ9UBM4 332 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.18
MSH5-206ENST00000423982 A0A096LPI6 279 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 TAPBPO15533 448 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 RGS10O43665 173 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 UPK1BO75841 260 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 PRAMEF12O95522 483 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 C21orf33P30042 268 aaPredicted RBP13.95□□□□□ -0.18
MSH5-206ENST00000423982 IRS1P35568 1242 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 NRIP1P48552 1158 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 CREMQ03060 361 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 MON1AQ86VX9 555 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 AADATQ8N5Z0 425 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 POF1BQ8WVV4 589 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 PEX13Q92968 403 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 SIRT5Q9NXA8 310 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 TPRKBQ9Y3C4 175 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 SNPHO15079 494 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 DNAJB5O75953 348 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 LRATO95237 230 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 EPOP01588 193 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 DNTTP04053 509 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 ITGAMP11215 1152 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 HOXD9P28356 352 aaPredicted RBP13.95□□□□□ -0.18
MSH5-206ENST00000423982 GRK5P34947 590 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 KCNQ1P51787 676 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 CLCN7P51798 805 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 C10orf120Q5SQS8 335 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 DESI1Q6ICB0 168 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 AKAP14Q86UN6 197 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 HIPK1Q86Z02 1210 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 RGL4Q8IZJ4 473 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 TTC29Q8NA56 475 aaPredicted RBP13.95□□□□□ -0.18
MSH5-206ENST00000423982 ZNF461Q8TAF7 563 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 CLP1Q92989 425 aaKnown RBP13.95□□□□□ -0.18
MSH5-206ENST00000423982 FATE1Q969F0 183 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 THG1LQ9NWX6 298 aaKnown RBP13.95□□□□□ -0.18
MSH5-206ENST00000423982 C1orf109Q9NX04 203 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 PDP1Q9P0J1 537 aaPredicted RBP13.95□□□□□ -0.18
MSH5-206ENST00000423982 DLGAP4Q9Y2H0 992 aa13.95□□□□□ -0.18
MSH5-206ENST00000423982 KIAA1671Q9BY89 1806 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 TRBV5-3A0A0A0MS03 114 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 UPK3BL1B0FP48 263 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 UPK3BL2E5RIL1 263 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 SCAMP3O14828 347 aaKnown RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 FFAR2O15552 330 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 PCDHGA12O60330 932 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 JUNDP17535 347 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 CLK1P49759 484 aaKnown RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 GZMMP51124 257 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 TAF12Q16514 161 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 SHQ1Q6PI26 577 aaKnown RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 NANOGNBQ7Z5D8 188 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 SYTL1Q8IYJ3 562 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 CLDN19Q8N6F1 224 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 LKAAEAR1Q8TD35 194 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 HOXD1Q9GZZ0 328 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 ZBP1Q9H171 429 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 SCN3BQ9NY72 215 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 MARCH2Q9P0N8 246 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 FNIP2Q9P278 1114 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 KLHL3Q9UH77 587 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 ZNF490Q9ULM2 529 aaPredicted RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 PLXNA4Q9HCM2 1894 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 VCANP13611 3396 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 GRM6O15303 877 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 WBP4O75554 376 aaKnown RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 RETP07949 1114 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 TACR1P25103 407 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 VLDLRP98155 873 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 TWF1Q12792 350 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 PLD1Q13393 1074 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 MAD2L1BPQ15013 274 aaPredicted RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 TAF1AQ15573 450 aaPredicted RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 PARP15Q460N3 678 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 CAPN13Q6MZZ7 669 aaPredicted RBP13.94□□□□□ -0.18
MSH5-206ENST00000423982 PROX1Q92786 737 aa13.94□□□□□ -0.18
MSH5-206ENST00000423982 DNASE1L2Q92874 299 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms