RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OR4N4Q8N0Y3 316 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 OR8K1Q8NGG5 319 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 LRRC45Q96CN5 670 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 MVB12AQ96EY5 273 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 C10orf90Q96M02 699 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 SPATA13Q96N96 652 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 GBP4Q96PP9 640 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 DNAJC7Q99615 494 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 TGIF2Q9GZN2 237 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 C14orf105Q9NVL8 296 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 IMPACTQ9P2X3 320 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 CDC14AQ9UNH5 594 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 NEU2Q9Y3R4 380 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 FAM169AQ9Y6X4 670 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 A0A0J9YVX5 310 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 F8W8V4 182 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 UQCRHP07919 91 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 TPH1P17752 444 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 MSNP26038 577 aaKnown RBP15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 FOXN2P32314 431 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 CSNK1G2P78368 415 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 HSPA14Q0VDF9 509 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 DSG2Q14126 1118 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 PRTGQ2VWP7 1150 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 ZNF766Q5HY98 468 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 FBXO42Q6P3S6 717 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 RNF44Q7L0R7 432 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 CCDC50Q8IVM0 306 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 ACTL9Q8TC94 416 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 PHF10Q8WUB8 498 aaKnown RBP15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 ASZ1Q8WWH4 475 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 MAGED4Q96JG8 741 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 RAB11FIP5Q9BXF6 653 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 HEMGNQ9BXL5 484 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 STOX2Q9P2F5 926 aaPredicted RBP15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 CIDEBQ9UHD4 219 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 TEKT2Q9UIF3 430 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 INTUQ9ULD6 942 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 SLC39A10Q9ULF5 831 aa15.9■□□□□ 0.14
CHCHD3-202ENST00000423635 ZNF469Q96JG9 3925 aaPredicted RBP15.89■□□□□ 0.14
CHCHD3-202ENST00000423635 OR1I1O60431 355 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 STK10O94804 968 aaKnown RBP15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 SLCO2B1O94956 709 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 MLYCDO95822 493 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 HEXBP07686 556 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 HOXB4P17483 251 aaPredicted RBP15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 SLC26A3P40879 764 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 CSE1LP55060 971 aaKnown RBP15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 HADHBP55084 474 aaKnown RBP15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 TPM4P67936 248 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 CDKL3Q8IVW4 592 aaPredicted RBP15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 OR2L3Q8NG85 312 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 CFAP61Q8NHU2 1237 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 HMGCLL1Q8TB92 370 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 CHP1Q99653 195 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 TUBB6Q9BUF5 446 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 CARD6Q9BX69 1037 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 SPTLC3Q9NUV7 552 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 TRPC4Q9UBN4 977 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 EFR3BQ9Y2G0 817 aa15.89■□□□□ 0.13
CHCHD3-202ENST00000423635 ASPDHA6ND91 283 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 OR51F1A6NGY5 319 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 FANCGO15287 622 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 PRPF4O43172 522 aaKnown RBP eCLIP15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 EIF2S1P05198 315 aaKnown RBP15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 RBP3P10745 1247 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 MARCKSL1P49006 195 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 ZNF33BQ06732 778 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 POU6F1Q14863 301 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 H3F3CQ6NXT2 135 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 MEX3BQ6ZN04 569 aaKnown RBP15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 NEK10Q6ZWH5 1172 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 LUZP1Q86V48 1076 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 AMER2Q8N7J2 671 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 OR2A1Q8NGT9 310 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 CCDC42Q96M95 316 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 ALS2CR12Q96Q35 445 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 MIPEPQ99797 713 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 TMUB1Q9BVT8 246 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 NHEJ1Q9H9Q4 299 aaPredicted RBP15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 MKKSQ9NPJ1 570 aaPredicted RBP15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 ZNHIT6Q9NWK9 470 aaKnown RBP15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 SPG11Q96JI7 2443 aa15.88■□□□□ 0.13
CHCHD3-202ENST00000423635 CCDC162PA2VCL2 907 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 OR2A25A4D2G3 310 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 GOLGA6L22H0YM25 854 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 TTI1O43156 1089 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 NRP2O60462 931 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 EIF3EP60228 445 aaKnown RBP15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 COPS2P61201 443 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 ALDH6A1Q02252 535 aaKnown RBP15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 PARP6Q2NL67 630 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 DARS2Q6PI48 645 aaKnown RBP15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 AMER3Q8N944 861 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 MDS2Q8NDY4 140 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 RAD51AP1Q96B01 352 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 SCMH1Q96GD3 660 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 DMRTA2Q96SC8 542 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 TTC1Q99614 292 aa15.87■□□□□ 0.13
CHCHD3-202ENST00000423635 ZFYVE21Q9BQ24 234 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms