RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 ITGA7Q13683 1181 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 EFTUD2Q15029 972 aaKnown RBP eCLIP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 E2F5Q15329 346 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 BMP2KLQ5H9B9 411 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 PRR27Q6MZM9 219 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 ZNF774Q6NX45 483 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 LEKR1Q6ZMV7 388 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 LINC00346Q8IVM7 164 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 LMNTD2Q8IXW0 634 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 CDK20Q8IZL9 346 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 GPRC5AQ8NFJ5 357 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 OPA3Q9H6K4 179 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 MED20Q9H944 212 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 PDE7BQ9NP56 450 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 PRR34Q9NV39 138 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 NDE1Q9NXR1 346 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 NUDT4Q9NZJ9 180 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 STK26Q9P289 416 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 CPSF2Q9P2I0 782 aaKnown RBP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 CHORDC1Q9UHD1 332 aaPredicted RBP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 PPIEQ9UNP9 301 aaKnown RBP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 PADI2Q9Y2J8 665 aa3.3□□□□□ -1.88
LINC00397-201ENST00000422074 ZNF646O15015 1829 aaPredicted RBP3.3□□□□□ -1.88
LINC00397-201ENST00000422074 ABCA7Q8IZY2 2146 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 HCFC1P51610 2035 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 SYNDIG1LA6NDD5 238 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 H0YAE9 185 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 CEACAM4O75871 244 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 TRUB2O95900 331 aaKnown RBP3.29□□□□□ -1.88
LINC00397-201ENST00000422074 LINGO3P0C6S8 592 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 AKR1B1P15121 316 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 PRKACGP22612 351 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 KLC1Q07866 573 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 ZNF74Q16587 644 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 MTHFSDQ2M296 383 aaKnown RBP3.29□□□□□ -1.88
LINC00397-201ENST00000422074 MOGAT2Q3SYC2 334 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 KIF6Q6ZMV9 814 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 THAP8Q8NA92 274 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 TDRD5Q8NAT2 981 aaKnown RBP3.29□□□□□ -1.88
LINC00397-201ENST00000422074 Q8NBF4 154 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 AVL9Q8NBF6 648 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 NUP37Q8NFH4 326 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 OR6S1Q8NH40 331 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 CFAP61Q8NHU2 1237 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 SFXN2Q96NB2 322 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 NKX3-1Q99801 234 aaPredicted RBP3.29□□□□□ -1.88
LINC00397-201ENST00000422074 FAM49AQ9H0Q0 323 aaPredicted RBP3.29□□□□□ -1.88
LINC00397-201ENST00000422074 TLE6Q9H808 572 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.29□□□□□ -1.88
LINC00397-201ENST00000422074 ANKEF1Q9NU02 776 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 PRMT7Q9NVM4 692 aaPredicted RBP3.29□□□□□ -1.88
LINC00397-201ENST00000422074 NKIRAS2Q9NYR9 191 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 IL17BQ9UHF5 180 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.29□□□□□ -1.88
LINC00397-201ENST00000422074 TNNQ9UQP3 1299 aa3.29□□□□□ -1.88
LINC00397-201ENST00000422074 LOC105371242A0A075B767 164 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 ARPC2O15144 300 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 ERAL1O75616 437 aaKnown RBP3.28□□□□□ -1.88
LINC00397-201ENST00000422074 PGM3O95394 542 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 JAK1P23458 1154 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 MPZP25189 248 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 PTGER4P35408 488 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 IFI35P80217 286 aaPredicted RBP3.28□□□□□ -1.88
LINC00397-201ENST00000422074 PAX8Q06710 450 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 HSPB3Q12988 150 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 SNAPC1Q16533 368 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 C16orf54Q6UWD8 224 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 FRRS1Q6ZNA5 592 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 CATSPERDQ86XM0 798 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 DNAAF5Q86Y56 855 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 MMD2Q8IY49 270 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 OR8H2Q8N162 312 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 SYT2Q8N9I0 419 aaPredicted RBP3.28□□□□□ -1.88
LINC00397-201ENST00000422074 C17orf47Q8NEP4 570 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 TSPAN14Q8NG11 270 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 PIGBQ92521 554 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 RASL10AQ92737 203 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 ZNF486Q96H40 463 aaPredicted RBP3.28□□□□□ -1.88
LINC00397-201ENST00000422074 NECTIN4Q96NY8 510 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 SEPHS2Q99611 448 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 SLF1Q9BQI6 1058 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 APOL6Q9BWW8 343 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 Q9H8V8 135 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 MYNNQ9NPC7 610 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 SPHK2Q9NRA0 654 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 MAGED1Q9Y5V3 778 aaPredicted RBP3.28□□□□□ -1.88
LINC00397-201ENST00000422074 CSNK1G3Q9Y6M4 447 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 ZNF318Q5VUA4 2279 aa3.28□□□□□ -1.88
LINC00397-201ENST00000422074 PASKQ96RG2 1323 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 PTGESO14684 152 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 MEIS2O14770 477 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 TEX28O15482 410 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 C22orf31O95567 290 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 RAB40ALP0C0E4 278 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 DARSP14868 501 aaKnown RBP3.27□□□□□ -1.89
LINC00397-201ENST00000422074 PFKFB1P16118 471 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 AZU1P20160 251 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 LHCGRP22888 699 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 MTHFRP42898 656 aa3.27□□□□□ -1.89
LINC00397-201ENST00000422074 TSFMP43897 325 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms