RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 NDC1Q9BTX1 674 aa25.33■■□□□ 1.65
CDK9-202ENST00000421939 PARVBQ9HBI1 364 aa25.33■■□□□ 1.65
CDK9-202ENST00000421939 MRPS30Q9NP92 439 aaKnown RBP25.33■■□□□ 1.65
CDK9-202ENST00000421939 SEC16AO15027 2179 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 OR2A25A4D2G3 310 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 NRP2O60462 931 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 RAB40ALP0C0E4 278 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 SAT1P21673 171 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 MAGEA4P43358 317 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 GPX6P59796 221 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 RPS18P62269 152 aaKnown RBP25.32■■□□□ 1.64
CDK9-202ENST00000421939 GUCY2DQ02846 1103 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 ERV3-1Q14264 604 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 ICE2Q659A1 982 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 C3orf62Q6ZUJ4 267 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 CYS1Q717R9 158 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 RNF44Q7L0R7 432 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 LRRC56Q8IYG6 542 aaPredicted RBP25.32■■□□□ 1.64
CDK9-202ENST00000421939 MMGT1Q8N4V1 131 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 VPS39Q96JC1 886 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 CCDC138Q96M89 665 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 MCMBPQ9BTE3 642 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 TXLNGQ9NUQ3 528 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 STOX2Q9P2F5 926 aaPredicted RBP25.32■■□□□ 1.64
CDK9-202ENST00000421939 ANKMY1Q9P2S6 941 aa25.32■■□□□ 1.64
CDK9-202ENST00000421939 FARSAQ9Y285 508 aaKnown RBP25.32■■□□□ 1.64
CDK9-202ENST00000421939 FAM159BA6NKW6 160 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 CXorf49A8MYA2 514 aaPredicted RBP25.31■■□□□ 1.64
CDK9-202ENST00000421939 C9J4A7 227 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 RECKO95980 971 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 PRB1P04280 392 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 ZNF37AP17032 561 aaPredicted RBP25.31■■□□□ 1.64
CDK9-202ENST00000421939 AGXTP21549 392 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 PRDX1Q06830 199 aaKnown RBP25.31■■□□□ 1.64
CDK9-202ENST00000421939 PHKG1Q16816 387 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 TCTE1Q5JU00 501 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 C1orf189Q5VU69 101 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 SYVN1Q86TM6 617 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 ENDOVQ8N8Q3 282 aaKnown RBP25.31■■□□□ 1.64
CDK9-202ENST00000421939 NOA1Q8NC60 698 aaKnown RBP25.31■■□□□ 1.64
CDK9-202ENST00000421939 KIF18AQ8NI77 898 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 ZNF285Q96NJ3 590 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 GBP5Q96PP8 586 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 PLCD4Q9BRC7 762 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 NLNQ9BYT8 704 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 CCDC177Q9NQR7 707 aaPredicted RBP25.31■■□□□ 1.64
CDK9-202ENST00000421939 ZDHHC18Q9NUE0 388 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 ABCF3Q9NUQ8 709 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 TXNDC16Q9P2K2 825 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 DHCR7Q9UBM7 475 aaKnown RBP25.31■■□□□ 1.64
CDK9-202ENST00000421939 CFAP46Q8IYW2 2715 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 BOD1L1Q8NFC6 3051 aa25.31■■□□□ 1.64
CDK9-202ENST00000421939 FER1L5A0AVI2 2057 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 IGKV1-8A0A0C4DH67 115 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 CTAGE15A4D2H0 777 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 CAPN1P07384 714 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 FAM87AP0C7U9 286 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 CTAGE8P0CG41 777 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 GCGRP47871 477 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 TAS2R39P59534 338 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 ABATP80404 500 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 GRM7Q14831 915 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 NCF4Q15080 339 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 DEFB109BQ30KR1 87 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 THEMIS2Q5TEJ8 643 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 MBOAT1Q6ZNC8 495 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 CTAGE6Q86UF2 777 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 CTAGE4Q8IX94 777 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 EXD3Q8N9H8 876 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 MED8Q96G25 268 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 PDLIM5Q96HC4 596 aaKnown RBP25.3■■□□□ 1.64
CDK9-202ENST00000421939 CPNE1Q99829 537 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 ZFYVE21Q9BQ24 234 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 C17orf62Q9BQA9 187 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 SEMA4CQ9C0C4 833 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 ENAMQ9NRM1 1142 aa25.3■■□□□ 1.64
CDK9-202ENST00000421939 PCM1Q15154 2024 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 A0A0J9YVX5 310 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 CDC14CA4D256 554 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 PABPN1LA6NDY0 278 aaKnown RBP25.29■■□□□ 1.64
CDK9-202ENST00000421939 C1QAP02745 245 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 FURINP09958 794 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 HIST1H2AGP0C0S8 130 aaPredicted RBP25.29■■□□□ 1.64
CDK9-202ENST00000421939 HIST1H2ADP20671 130 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 CCR10P46092 362 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 VSX2P58304 361 aaPredicted RBP25.29■■□□□ 1.64
CDK9-202ENST00000421939 TBPL1P62380 186 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 COL9A2Q14055 689 aaPredicted RBP25.29■■□□□ 1.64
CDK9-202ENST00000421939 ZNF460Q14592 562 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 FRMPD2BQ6IN97 320 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 ZNF425Q6IV72 752 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 TMEM207Q6UWW9 146 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 PAQR7Q86WK9 346 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 HIST1H2AHQ96KK5 128 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 HIST1H2AJQ99878 128 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 H2AFJQ9BTM1 129 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 LRRC4CQ9HCJ2 640 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 UTP6Q9NYH9 597 aaKnown RBP25.29■■□□□ 1.64
CDK9-202ENST00000421939 POLHQ9Y253 713 aa25.29■■□□□ 1.64
CDK9-202ENST00000421939 SRPX2O60687 465 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms