RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 KCTD4Q8WVF5 259 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 PYCR2Q96C36 320 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 FBXL8Q96CD0 374 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 NXNL1Q96CM4 212 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 UBXN10Q96LJ8 280 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 PARD6BQ9BYG5 372 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 DPH1Q9BZG8 443 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 PCBD2Q9H0N5 130 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 ALG9Q9H6U8 611 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 ACSL6Q9UKU0 697 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 PLCL2Q9UPR0 1127 aa15.15■□□□□ 0.02
BRAT1-202ENST00000421712 ACACBO00763 2458 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 SRRM3A6NNA2 597 aaPredicted RBP15.14■□□□□ 0.01
BRAT1-202ENST00000421712 E7EQ34 232 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 RAD1O60671 282 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 SCRG1O75711 98 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 OR2B3O76000 313 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 ALDOAP04075 364 aaKnown RBP15.14■□□□□ 0.01
BRAT1-202ENST00000421712 NTRK1P04629 796 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 ZNF28P17035 718 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 TFEBP19484 476 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 ATP1A2P50993 1020 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 YBX1P67809 324 aaKnown RBP15.14■□□□□ 0.01
BRAT1-202ENST00000421712 ABATP80404 500 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 IRF9Q00978 393 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 OR4D1Q15615 310 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 FAM83EQ2M2I3 478 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 BROXQ5VW32 411 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 WDR93Q6P2C0 686 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 LRRC56Q8IYG6 542 aaPredicted RBP15.14■□□□□ 0.01
BRAT1-202ENST00000421712 CACNA2D3Q8IZS8 1091 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 NLGN4XQ8N0W4 816 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 DNAJC22Q8N4W6 341 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 NLGN4YQ8NFZ3 816 aaPredicted RBP15.14■□□□□ 0.01
BRAT1-202ENST00000421712 OR1L3Q8NH93 324 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 STAG3L4Q8TBR4 150 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 KIAA1191Q96A73 305 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 PTERQ96BW5 349 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 TSNARE1Q96NA8 513 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 FCRL4Q96PJ5 515 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 EPB41L4BQ9H329 900 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 CD274Q9NZQ7 290 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 SNX7Q9UNH6 387 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 CHD8Q9HCK8 2581 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 APC2O95996 2303 aa15.14■□□□□ 0.01
BRAT1-202ENST00000421712 SPTBP11277 2137 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 FREM2Q5SZK8 3169 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 A0A0J9YVX5 310 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 IQANK1A0A1B0GTG1 560 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 TEX51A0A1B0GUA7 166 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 SMIM23A6NLE4 172 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 SUPT3HB4E1H0 165 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 H7BY64 318 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 SUPT3HO75486 399 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 TIAF1O95411 115 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 CCNYL3P0C7X3 344 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 MSL3P1P0C860 447 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 SLC26A3P40879 764 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 GLRBP48167 497 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 HNMTP50135 292 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 CDKL1Q00532 357 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 DLG1Q12959 904 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 CLN3Q13286 438 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 TGFBIQ15582 683 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 PPP1R3AQ16821 1122 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 MANEAQ5SRI9 462 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 ADGRD1Q6QNK2 874 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 C6orf15Q6UXA7 325 aaPredicted RBP15.13■□□□□ 0.01
BRAT1-202ENST00000421712 C17orf64Q86WR6 236 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 SPACA3Q8IXA5 215 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 GALNT6Q8NCL4 622 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 OR56A3Q8NH54 315 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 HNRNPLLQ8WVV9 542 aaKnown RBP15.13■□□□□ 0.01
BRAT1-202ENST00000421712 MTBPQ96DY7 904 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 CLIP3Q96DZ5 547 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 PRAP1Q96NZ9 151 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 SELENOSQ9BQE4 189 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 PLCD4Q9BRC7 762 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 HAUS8Q9BT25 410 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 CHRNA10Q9GZZ6 450 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 SPRTNQ9H040 489 aaPredicted RBP15.13■□□□□ 0.01
BRAT1-202ENST00000421712 SLC6A20Q9NP91 592 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 IGSF5Q9NSI5 407 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 EURLQ9NYK6 297 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 WWOXQ9NZC7 414 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 PSMC3IPQ9P2W1 217 aaPredicted RBP15.13■□□□□ 0.01
BRAT1-202ENST00000421712 TBK1Q9UHD2 729 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 PILRAQ9UKJ1 303 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 WDFY3Q8IZQ1 3526 aa15.13■□□□□ 0.01
BRAT1-202ENST00000421712 SDK2Q58EX2 2172 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 ADAMTS20P59510 1910 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 ASPMQ8IZT6 3477 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 HCRTR1O43613 425 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 KLHL2O95198 593 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 MT-ND3P03897 115 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 SHBGP04278 402 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 EIF2S1P05198 315 aaKnown RBP15.12■□□□□ 0.01
BRAT1-202ENST00000421712 ATXN8OSP0DMR3 200 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 GCAP28676 217 aa15.12■□□□□ 0.01
BRAT1-202ENST00000421712 HSD17B3P37058 310 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms