RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 POLR3HQ9Y535 204 aaPredicted RBP20.27■□□□□ 0.84
GPC1-202ENST00000420138 PCDHGA7Q9Y5G6 932 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 ASPDHA6ND91 283 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 CLGNO14967 610 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 FKBP6O75344 327 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 RSL1D1O76021 490 aaKnown RBP20.27■□□□□ 0.84
GPC1-202ENST00000420138 APBB3O95704 486 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 VHLP40337 213 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 HNF4AP41235 474 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 IMPG1Q17R60 797 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 HPS6Q86YV9 775 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 TBC1D21Q8IYX1 336 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 GJD3Q8N144 294 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 FRMD1Q8N878 549 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 TSTD1Q8NFU3 115 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 TSPEARQ8WU66 669 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 RSRC1Q96IZ7 334 aaKnown RBP20.27■□□□□ 0.84
GPC1-202ENST00000420138 HHIPQ96QV1 700 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 OR2M4Q96R27 311 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 CCDC177Q9NQR7 707 aaPredicted RBP20.27■□□□□ 0.84
GPC1-202ENST00000420138 C1orf109Q9NX04 203 aa20.27■□□□□ 0.84
GPC1-202ENST00000420138 WSB2Q9NYS7 404 aaPredicted RBP20.27■□□□□ 0.84
GPC1-202ENST00000420138 BBIP1A8MTZ0 92 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 MRASO14807 208 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 CCR5P51681 352 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 SESN3P58005 492 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 AP2B1P63010 937 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 ZNF33BQ06732 778 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 ARHGAP19Q14CB8 494 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 CYP2A13Q16696 494 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 MMEL1Q495T6 779 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 KIAA0895LQ68EN5 471 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 ADNP2Q6IQ32 1131 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 PJA1Q8NG27 643 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 NUDT8Q8WV74 236 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 C12orf66Q96MD2 445 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 WDR92Q96MX6 357 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 CDRT15Q96T59 188 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 TRIT1Q9H3H1 467 aaKnown RBP20.26■□□□□ 0.83
GPC1-202ENST00000420138 NDE1Q9NXR1 346 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 PACSIN3Q9UKS6 424 aa20.26■□□□□ 0.83
GPC1-202ENST00000420138 PI15O43692 258 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 SEC22BO75396 215 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 RPN2P04844 631 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 RPSAP08865 295 aaKnown RBP20.25■□□□□ 0.83
GPC1-202ENST00000420138 AKT2P31751 481 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 PIGGQ5H8A4 983 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 AAGABQ6PD74 315 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 HACD2Q6Y1H2 254 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 TMPRSS11BQ86T26 416 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 SPDL1Q96EA4 605 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 PRDM8Q9NQV8 689 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 SPATA6Q9NWH7 488 aaPredicted RBP20.25■□□□□ 0.83
GPC1-202ENST00000420138 HS3ST3A1Q9Y663 406 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 A0A1W2PP18 115 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 IDSP22304 550 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 PSME3P61289 254 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 YPEL5P62699 121 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 YBX1P67809 324 aaKnown RBP20.25■□□□□ 0.83
GPC1-202ENST00000420138 MAD2L1Q13257 205 aaPredicted RBP20.25■□□□□ 0.83
GPC1-202ENST00000420138 PTGR1Q14914 329 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 TAF11Q15544 211 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 UAP1L1Q3KQV9 507 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 USP39Q53GS9 565 aaKnown RBP20.25■□□□□ 0.83
GPC1-202ENST00000420138 ATG9BQ674R7 924 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 LRRC74BQ6ZQY2 392 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 ABI3BPQ7Z7G0 1075 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 C2orf73Q8N5S3 287 aaPredicted RBP20.25■□□□□ 0.83
GPC1-202ENST00000420138 OR7G3Q8NG95 312 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 SETD7Q8WTS6 366 aaKnown RBP20.25■□□□□ 0.83
GPC1-202ENST00000420138 TSACCQ96A04 125 aaPredicted RBP20.25■□□□□ 0.83
GPC1-202ENST00000420138 VPS33AQ96AX1 596 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 BIRC7Q96CA5 298 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 APIPQ96GX9 242 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 SERPINI1Q99574 410 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 EHD1Q9H4M9 534 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 CD320Q9NPF0 282 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 SCHIP1Q9P0W5 487 aaPredicted RBP20.25■□□□□ 0.83
GPC1-202ENST00000420138 NDUFAF1Q9Y375 327 aa20.25■□□□□ 0.83
GPC1-202ENST00000420138 A0A1W2PPV9 198 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 FAM234BA2RU67 622 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 CFLARO15519 480 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 C1GALT1C1LP0DN25 315 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 JAK1P23458 1154 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 POLR2JP52435 117 aaKnown RBP20.24■□□□□ 0.83
GPC1-202ENST00000420138 CSTF3Q12996 717 aaKnown RBP20.24■□□□□ 0.83
GPC1-202ENST00000420138 TSTA3Q13630 321 aaPredicted RBP20.24■□□□□ 0.83
GPC1-202ENST00000420138 CEACAM7Q14002 265 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 TLR1Q15399 786 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 COQ5Q5HYK3 327 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 LCTLQ6UWM7 567 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 BNC2Q6ZN30 1099 aaPredicted RBP20.24■□□□□ 0.83
GPC1-202ENST00000420138 LINC01555Q8NAE3 123 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 SLC5A11Q8WWX8 675 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 JADE3Q92613 823 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 CMTM7Q96FZ5 175 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 ZNF570Q96NI8 536 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 FERD3LQ96RJ6 166 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 ORAI3Q9BRQ5 295 aa20.24■□□□□ 0.83
GPC1-202ENST00000420138 GPATCH1Q9BRR8 931 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms