RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 DDIASQ8IXT1 998 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 CPSF7Q8N684 471 aaKnown RBP13.31□□□□□ -0.28
CHMP5-202ENST00000419016 GBP7Q8N8V2 638 aaPredicted RBP13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ZNF548Q8NEK5 533 aaPredicted RBP13.31□□□□□ -0.28
CHMP5-202ENST00000419016 FAM46DQ8NEK8 389 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ABHD11Q8NFV4 315 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 OR2A1Q8NGT9 310 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 SLC37A2Q8TED4 501 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 SLC5A11Q8WWX8 675 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 POT1Q9NUX5 634 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ZSCAN32Q9NX65 697 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 OR6C2Q9NZP2 312 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 SPASTQ9UBP0 616 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ZFP69BQ9UJL9 534 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 CACNA1EQ15878 2313 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ATXN2Q99700 1313 aaKnown RBP13.31□□□□□ -0.28
CHMP5-202ENST00000419016 LMO7DNF2Z398 122 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 YY2O15391 372 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 KDM1AO60341 852 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ULK1O75385 1050 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 PIAS2O75928 621 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 KRT6AP02538 564 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 KRT6BP04259 564 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 SP9P0CG40 484 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 C1GALT1C1LP0DN25 315 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 SLC2A4P14672 509 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 PEBP1P30086 187 aaKnown RBP13.31□□□□□ -0.28
CHMP5-202ENST00000419016 SHMT2P34897 504 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 KRT6CP48668 564 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 C21orf59P57076 290 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ZNF33BQ06732 778 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 BNIP1Q12981 228 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 LACTB2Q53H82 288 aaPredicted RBP13.31□□□□□ -0.28
CHMP5-202ENST00000419016 FRG2Q64ET8 278 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 OGFOD2Q6N063 350 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 IL27RAQ6UWB1 636 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 FAM129CQ86XR2 697 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 TREML1Q86YW5 311 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 WDR20Q8TBZ3 569 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ZDHHC1Q8WTX9 485 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 PTCD3Q96EY7 689 aaKnown RBP13.31□□□□□ -0.28
CHMP5-202ENST00000419016 FRG2BQ96QU4 278 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 PFDN4Q9NQP4 134 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ARMCX1Q9P291 453 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 ZNF490Q9ULM2 529 aaPredicted RBP13.31□□□□□ -0.28
CHMP5-202ENST00000419016 TRIM33Q9UPN9 1127 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 DYRK1BQ9Y463 629 aa13.31□□□□□ -0.28
CHMP5-202ENST00000419016 LAMA1P25391 3075 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 NPIPB8E9PQR5 432 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 AQP9O43315 295 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 T-ENOLP0DO92 83 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 GNSP15586 552 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 VARSP26640 1264 aaKnown RBP13.3□□□□□ -0.28
CHMP5-202ENST00000419016 RXRGP48443 463 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 PRDX1Q06830 199 aaKnown RBP13.3□□□□□ -0.28
CHMP5-202ENST00000419016 UBAP2LQ14157 1087 aaKnown RBP13.3□□□□□ -0.28
CHMP5-202ENST00000419016 GPR18Q14330 331 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 KRT72Q14CN4 511 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 SHBQ15464 509 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 NXNQ6DKJ4 435 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 OGFOD3Q6PK18 319 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 TMPRSS11BQ86T26 416 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 AMIGO1Q86WK6 493 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 GKN2Q86XP6 184 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 MYLK4Q86YV6 388 aaPredicted RBP13.3□□□□□ -0.28
CHMP5-202ENST00000419016 ADGRF3Q8IZF5 1079 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 OR4K1Q8NGD4 311 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 LMX1AQ8TE12 382 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 LCN9Q8WX39 176 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 HBEGFQ99075 208 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 EFCAB11Q9BUY7 163 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 GEMIN8Q9NWZ8 242 aaKnown RBP13.3□□□□□ -0.28
CHMP5-202ENST00000419016 GIMAP2Q9UG22 337 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 SUSD2Q9UGT4 822 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 TAC3Q9UHF0 121 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 SNX6Q9UNH7 406 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 SNX11Q9Y5W9 270 aa13.3□□□□□ -0.28
CHMP5-202ENST00000419016 IGKV1-8A0A0C4DH67 115 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 LSM1O15116 133 aaKnown RBP13.29□□□□□ -0.28
CHMP5-202ENST00000419016 PDYNP01213 254 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 ALDOCP09972 364 aaKnown RBP13.29□□□□□ -0.28
CHMP5-202ENST00000419016 PSMB5P28074 263 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 TSTA3Q13630 321 aaPredicted RBP13.29□□□□□ -0.28
CHMP5-202ENST00000419016 THEMIS2Q5TEJ8 643 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 SYT12Q8IV01 421 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 LAS2Q8IYD9 372 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 OR7G3Q8NG95 312 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 OR4E2Q8NGC2 313 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 FLVCR1-AS1Q8TAF5 88 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 TUBGCP3Q96CW5 907 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 ACAT2Q9BWD1 397 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 SPNS1Q9H2V7 528 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 UCKL1Q9NWZ5 548 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 SPHK1Q9NYA1 384 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 TSC22D4Q9Y3Q8 395 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 PCDHB11Q9Y5F2 797 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 TDRD6O60522 2096 aaKnown RBP13.29□□□□□ -0.28
CHMP5-202ENST00000419016 SLC28A1O00337 649 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 BTN3A3O00478 584 aa13.29□□□□□ -0.28
CHMP5-202ENST00000419016 NOBOXO60393 691 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms