RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ST13P5Q8NFI4 369 aaPredicted RBP11.56□□□□□ -0.56
LIMK1-202ENST00000418310 PDLIM5Q96HC4 596 aaKnown RBP11.56□□□□□ -0.56
LIMK1-202ENST00000418310 KCNC2Q96PR1 638 aa11.56□□□□□ -0.56
LIMK1-202ENST00000418310 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
LIMK1-202ENST00000418310 ROGDIQ9GZN7 287 aa11.56□□□□□ -0.56
LIMK1-202ENST00000418310 RMND5AQ9H871 391 aa11.56□□□□□ -0.56
LIMK1-202ENST00000418310 SH3BP4Q9P0V3 963 aa11.56□□□□□ -0.56
LIMK1-202ENST00000418310 RAPGEFL1Q9UHV5 662 aa11.56□□□□□ -0.56
LIMK1-202ENST00000418310 ERVK-11Q9UQG0 969 aa11.56□□□□□ -0.56
LIMK1-202ENST00000418310 SH3GLB1Q9Y371 365 aa11.56□□□□□ -0.56
LIMK1-202ENST00000418310 ZSCAN9O15535 394 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 RECQL5O94762 991 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 POU2F1P14859 743 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 SERPINA4P29622 427 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 OR1E2P47887 323 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 PREPP48147 710 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 CLK3P49761 638 aaKnown RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 COL9A2Q14055 689 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 HKDC1Q2TB90 917 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 ADPRMQ3LIE5 342 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 CCSMST1Q4G0I0 132 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 Q6ZVU0 165 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 TERB1Q8NA31 727 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 TTC29Q8NA56 475 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 ZNF461Q8TAF7 563 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 SPPL2AQ8TCT8 520 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 FAR1Q8WVX9 515 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 LZICQ8WZA0 190 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 HSH2DQ96JZ2 352 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 YTHDF1Q9BYJ9 559 aaKnown RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 INTS6Q9UL03 887 aaKnown RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 BTBD3Q9Y2F9 522 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 TESMINQ9Y4I5 508 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 IGSF6O95976 241 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 ACPPP15309 386 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 CDH3P22223 829 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 ARHGDIAP52565 204 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 AP1S1P61966 158 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 RELAQ04206 551 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 INO80DQ53TQ3 878 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 XKR6Q5GH73 641 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 OR2T5Q6IEZ7 315 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 SLC8B1Q6J4K2 584 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 NOXRED1Q6NXP6 359 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 SVOPLQ8N434 492 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 DCAF4L2Q8NA75 395 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 CHST14Q8NCH0 376 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 GLB1L3Q8NCI6 653 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 PIK3C3Q8NEB9 887 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 OR2T29Q8NH02 315 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 ADAMTS19Q8TE59 1207 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 FKBP10Q96AY3 582 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 TAMM41Q96BW9 452 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 CCDC115Q96NT0 180 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 TUBA1CQ9BQE3 449 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 KRT84Q9NSB2 600 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 SACM1LQ9NTJ5 587 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 THG1LQ9NWX6 298 aaKnown RBP11.55□□□□□ -0.56
LIMK1-202ENST00000418310 SIRT5Q9NXA8 310 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 TMEM9Q9P0T7 183 aa11.55□□□□□ -0.56
LIMK1-202ENST00000418310 LAMP1P11279 417 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 IDH2P48735 452 aaKnown RBP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 MASP1P48740 699 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 BCAP31P51572 246 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 GRSF1Q12849 480 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 PRR23BQ6ZRT6 265 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 TMEM150AQ86TG1 271 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 SORCS1Q8WY21 1168 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 MUL1Q969V5 352 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 ALG14Q96F25 216 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 SH3YL1Q96HL8 342 aaPredicted RBP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 KCNH6Q9H252 994 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 KCTD5Q9NXV2 234 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 TRPS1Q9UHF7 1281 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 SNX6Q9UNH7 406 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 RBMX2Q9Y388 322 aaKnown RBP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 OR51B4Q9Y5P0 310 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 A0A1W2PRU2 124 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 YY2O15391 372 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 ERN1O75460 977 aaKnown RBP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 NSG1P42857 185 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 CLDN8P56748 225 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 INAQ16352 499 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 CTF1Q16619 201 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 TRIM46Q7Z4K8 759 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 C2orf73Q8N5S3 287 aaPredicted RBP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 AADATQ8N5Z0 425 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 PROX1Q92786 737 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 USP7Q93009 1102 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 MAGED4Q96JG8 741 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 HTATIP2Q9BUP3 242 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 NTMT1Q9BV86 223 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 HERC2P3Q9BVR0 1158 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 ENPP5Q9UJA9 477 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 PLXNA4Q9HCM2 1894 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 CBFA2T3O75081 653 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 EPN2O95208 641 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 HPRP00739 348 aa11.54□□□□□ -0.56
LIMK1-202ENST00000418310 MRPL19P49406 292 aaKnown RBP11.54□□□□□ -0.56
LIMK1-202ENST00000418310 SP3Q02447 781 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms