RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 WDR20Q8TBZ3 569 aa16.4■□□□□ 0.22
CALD1-204ENST00000417172 CCT7Q99832 543 aa16.4■□□□□ 0.22
CALD1-204ENST00000417172 AIG1Q9NVV5 245 aa16.4■□□□□ 0.22
CALD1-204ENST00000417172 CUEDC1Q9NWM3 386 aaPredicted RBP16.4■□□□□ 0.22
CALD1-204ENST00000417172 TRNAU1APQ9NX07 287 aaKnown RBP16.4■□□□□ 0.22
CALD1-204ENST00000417172 DYRK1BQ9Y463 629 aa16.4■□□□□ 0.22
CALD1-204ENST00000417172 POLR3HQ9Y535 204 aaPredicted RBP16.4■□□□□ 0.22
CALD1-204ENST00000417172 GPR45Q9Y5Y3 372 aa16.4■□□□□ 0.22
CALD1-204ENST00000417172 GOLGA4Q13439 2230 aaKnown RBP16.4■□□□□ 0.22
CALD1-204ENST00000417172 BDP1A6H8Y1 2624 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 AIM2O14862 343 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 SLC2A4P14672 509 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 RASSF2P50749 326 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 STX1BP61266 288 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 CYLC2Q14093 348 aaPredicted RBP16.39■□□□□ 0.21
CALD1-204ENST00000417172 SLBPQ14493 270 aaKnown RBP eCLIP16.39■□□□□ 0.21
CALD1-204ENST00000417172 ABRAXAS1Q6UWZ7 409 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 LONP2Q86WA8 852 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 PHACTR4Q8IZ21 702 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 SLC5A11Q8WWX8 675 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 RCN3Q96D15 328 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 SPACA7Q96KW9 195 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.39■□□□□ 0.212e-6■□□□□ 8.8
CALD1-204ENST00000417172 SPATA6Q9NWH7 488 aaPredicted RBP16.39■□□□□ 0.21
CALD1-204ENST00000417172 GEMIN8Q9NWZ8 242 aaKnown RBP16.39■□□□□ 0.21
CALD1-204ENST00000417172 ZDBF2Q9HCK1 2354 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 NCOR1O75376 2440 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 A0A1W2PR77 199 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 A8MUI8 341 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 SLC28A1O00337 649 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 TOR1BO14657 336 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 RGS14O43566 566 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 UGDHO60701 494 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 PCNAP12004 261 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 PRDX6P30041 224 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 PKLRP30613 574 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 UFM1P61960 85 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 ILF3Q12906 894 aaKnown RBP eCLIP16.39■□□□□ 0.214e-6■■■■□ 20.7
CALD1-204ENST00000417172 SPATA19Q7Z5L4 167 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 MIER2Q8N344 545 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 CADM4Q8NFZ8 388 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 SH3KBP1Q96B97 665 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 NPAS2Q99743 824 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 TM9SF3Q9HD45 589 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 PFDN4Q9NQP4 134 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 SDR39U1Q9NRG7 319 aaPredicted RBP16.39■□□□□ 0.21
CALD1-204ENST00000417172 GPRC5BQ9NZH0 403 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 SPATA7Q9P0W8 599 aa16.39■□□□□ 0.21
CALD1-204ENST00000417172 DMDP11532 3685 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 SLC22A2O15244 555 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 GSC2O15499 205 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 NRP2O60462 931 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 HNRNPCL1O60812 293 aaKnown RBP16.38■□□□□ 0.21
CALD1-204ENST00000417172 ETHE1O95571 254 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 THRAP10827 490 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 G6PDP11413 515 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 F3P13726 295 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 IDO1P14902 403 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 CD38P28907 300 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 ADSLP30566 484 aaPredicted RBP16.38■□□□□ 0.21
CALD1-204ENST00000417172 NUDT1P36639 197 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 SLC19A1P41440 591 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 FNTBP49356 437 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 RAB28P51157 221 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 ATP4BP51164 291 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 SRSF5Q13243 272 aaKnown RBP16.38■□□□□ 0.21
CALD1-204ENST00000417172 ARHGAP19Q14CB8 494 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 SF1Q15637 639 aaKnown RBP16.38■□□□□ 0.21
CALD1-204ENST00000417172 USP39Q53GS9 565 aaKnown RBP16.38■□□□□ 0.21
CALD1-204ENST00000417172 IL23RQ5VWK5 629 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 LCTLQ6UWM7 567 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 RNF165Q6ZSG1 346 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 PARGQ86W56 976 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 OR7G3Q8NG95 312 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 RP9Q8TA86 221 aaKnown RBP16.38■□□□□ 0.21
CALD1-204ENST00000417172 GPBAR1Q8TDU6 330 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 CLPTM1LQ96KA5 538 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 MVB12BQ9H7P6 319 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 LRTM1Q9HBL6 345 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 TAAR2Q9P1P5 351 aa16.38■□□□□ 0.21
CALD1-204ENST00000417172 PIPSLA2A3N6 862 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 MAGEB17A8MXT2 336 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 H0YHG0 523 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 NR5A2O00482 541 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 FBP2O00757 339 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 SEC22BO75396 215 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 C1GALT1C1LP0DN25 315 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 EZRP15311 586 aaKnown RBP16.37■□□□□ 0.21
CALD1-204ENST00000417172 ITGAXP20702 1163 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 HNF4AP41235 474 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 CASP2P42575 452 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 NUDT2P50583 147 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 PCDH1Q08174 1060 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 SIGLEC14Q08ET2 396 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 E2F2Q14209 437 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 RPS6KA2Q15349 733 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 ATG9BQ674R7 924 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 NXPE4Q6UWF7 544 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 CHCHD4Q8N4Q1 142 aa16.37■□□□□ 0.21
CALD1-204ENST00000417172 SMPDL3AQ92484 453 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms