RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 NCKAP1Q9Y2A7 1128 aa5.86□□□□□ -1.47
GTF3AP1-201ENST00000416942 CA5BQ9Y2D0 317 aa5.86□□□□□ -1.47
GTF3AP1-201ENST00000416942 SNX9Q9Y5X1 595 aa5.86□□□□□ -1.47
GTF3AP1-201ENST00000416942 U3KQA8 63 aa5.86□□□□□ -1.47
GTF3AP1-201ENST00000416942 LRRK1Q38SD2 2015 aa5.86□□□□□ -1.47
GTF3AP1-201ENST00000416942 DCHS2Q6V1P9 2916 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 TARSL2A2RTX5 802 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 OR6C68A6NDL8 312 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 STMND1H3BQB6 276 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 CPLX1O14810 134 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 RNASEH2AO75792 299 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 NEBLO76041 1014 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 CBX6O95503 412 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 GP1BAP07359 652 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 LIPCP11150 499 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 YWHAQP27348 245 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 RPA1P27694 616 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 MAT2AP31153 395 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 CCT6AP40227 531 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 HTR6P50406 440 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 SELENOVP59797 346 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 ZNF177Q13360 481 aaPredicted RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 ANKRD1Q15327 319 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 KYAT1Q16773 422 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 INO80DQ53TQ3 878 aaPredicted RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 MDH1BQ5I0G3 518 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 SH2D4BQ5SQS7 431 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 GUSBP11Q6P575 273 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 EFL1Q7Z2Z2 1120 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 TRIM74Q86UV6 250 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 TRIM73Q86UV7 250 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 HEATR4Q86WZ0 1026 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 ZDHHC17Q8IUH5 632 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 TMEM86AQ8N2M4 240 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 HORMAD2Q8N7B1 307 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 ERMNQ8TAM6 284 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 PDCD6IPQ8WUM4 868 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 URB1-AS1Q96HZ7 61 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 PIWIL1Q96J94 861 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 ZNF560Q96MR9 790 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 TSPAN18Q96SJ8 248 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 POLDIP3Q9BY77 421 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 PRSS16Q9NQE7 514 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 DDX19AQ9NUU7 478 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 DONSONQ9NYP3 566 aa5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 CPSF3Q9UKF6 684 aaKnown RBP5.85□□□□□ -1.47
GTF3AP1-201ENST00000416942 MED13LQ71F56 2210 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 PLXNA2O75051 1894 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 ARHGAP10A1A4S6 786 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 LRRC72A6NJI9 287 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 E9PMD0 336 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 CLDN5O00501 218 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 MID1O15344 667 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 GIMD1P0DJR0 217 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 ALPPL2P10696 532 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 ARSBP15848 533 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 NR1D1P20393 614 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 CDC25AP30304 524 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 ARRB2P32121 409 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 UGT1A5P35504 534 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 RFX2P48378 723 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 LHX1P48742 406 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 TFAMQ00059 246 aaKnown RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 GPR18Q14330 331 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 SOWAHAQ2M3V2 549 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 EIF2S3LQ2VIR3 472 aaKnown RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 ZNF542PQ5EBM4 170 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 DCAF12L2Q5VW00 463 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 ZNF776Q68DI1 518 aaPredicted RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 GJB7Q6PEY0 223 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 ZNF517Q6ZMY9 492 aaPredicted RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 Q6ZTK2 550 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 RSRC2Q7L4I2 434 aaKnown RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 FBXO39Q8N4B4 442 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 SETD9Q8NE22 299 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 OR2T34Q8NGX1 318 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 PCED1BQ96HM7 432 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 ZSCAN31Q96LW9 406 aaPredicted RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 JAKMIP1Q96N16 626 aaKnown RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 TWNKQ96RR1 684 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 OMDQ99983 421 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 NTPCRQ9BSD7 190 aaKnown RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 NPLQ9BXD5 320 aaPredicted RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 KLHL31Q9H511 634 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 PLAC1Q9HBJ0 212 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 EPB41L5Q9HCM4 733 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 GRHL1Q9NZI5 618 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 PISDQ9UG56 409 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 LSM7Q9UK45 103 aaKnown RBP5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 PLA2G4CQ9UP65 541 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 C2CD2Q9Y426 696 aa5.84□□□□□ -1.47
GTF3AP1-201ENST00000416942 HIVEP3Q5T1R4 2406 aa5.84□□□□□ -1.48
GTF3AP1-201ENST00000416942 ESPL1Q14674 2120 aa5.83□□□□□ -1.48
GTF3AP1-201ENST00000416942 UBE4BO95155 1302 aa5.83□□□□□ -1.48
GTF3AP1-201ENST00000416942 VWA3AA6NCI4 1184 aa5.83□□□□□ -1.48
GTF3AP1-201ENST00000416942 PENKP01210 267 aaPredicted RBP5.83□□□□□ -1.48
GTF3AP1-201ENST00000416942 CYP1A2P05177 515 aa5.83□□□□□ -1.48
GTF3AP1-201ENST00000416942 KRT19P08727 400 aa5.83□□□□□ -1.48
GTF3AP1-201ENST00000416942 OR52Z1P0C646 297 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms