RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 ACAT2Q9BWD1 397 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 TBC1D10AQ9BXI6 508 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 EPB41L1Q9H4G0 881 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 PELI2Q9HAT8 420 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 MRPS30Q9NP92 439 aaKnown RBP8.12□□□□□ -1.11
RBM39-208ENST00000416108 TMEM9BQ9NQ34 198 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 INTS7Q9NVH2 962 aaKnown RBP8.12□□□□□ -1.11
RBM39-208ENST00000416108 FAM86C1Q9NVL1 165 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 HRASLS2Q9NWW9 162 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 KCNK4Q9NYG8 393 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 ACTR10Q9NZ32 417 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 LRIT1Q9P2V4 623 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 VTI1BQ9UEU0 232 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 MARCOQ9UEW3 520 aaPredicted RBP8.12□□□□□ -1.11
RBM39-208ENST00000416108 PADI4Q9UM07 663 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 ASB1Q9Y576 335 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 PCDHGB2Q9Y5G2 931 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 ENTPD2Q9Y5L3 495 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 TRIOO75962 3097 aa8.12□□□□□ -1.11
RBM39-208ENST00000416108 ASCC3Q8N3C0 2202 aaKnown RBP8.11□□□□□ -1.11
RBM39-208ENST00000416108 LNP1A1A4G5 178 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 CPED1A4D0V7 1026 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 OR5K3A6NET4 321 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 TRPC5OSA6NMA1 111 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 E7EQ34 232 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 BTN3A3O00478 584 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 OR7A17O14581 309 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 PPM1DO15297 605 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 MAP3K7O43318 606 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 SIGLEC6O43699 453 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 DUX1O43812 170 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 UBXN7O94888 489 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 TGDSO95455 350 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 FAM107AO95990 144 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 KRT6AP02538 564 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 KRT6BP04259 564 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 CAPN1P07384 714 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 C1GALT1C1LP0DN25 315 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 UROSP10746 265 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 CDH1P12830 882 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 TYRP1P17643 537 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 POLR2CP19387 275 aaPredicted RBP8.11□□□□□ -1.11
RBM39-208ENST00000416108 HRH2P25021 359 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 NBL1P41271 181 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 KRT6CP48668 564 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 IFT88Q13099 833 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 TRAF3Q13114 568 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 SF3A2Q15428 464 aaKnown RBP8.11□□□□□ -1.11
RBM39-208ENST00000416108 GGTA1PQ4G0N0 100 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 LIPJQ5W064 366 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 ICE2Q659A1 982 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 GRHL2Q6ISB3 625 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 KANSL1Q7Z3B3 1105 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 SYVN1Q86TM6 617 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 C17orf82Q86X59 251 aaPredicted RBP8.11□□□□□ -1.11
RBM39-208ENST00000416108 DDIASQ8IXT1 998 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 LRRC56Q8IYG6 542 aaPredicted RBP8.11□□□□□ -1.11
RBM39-208ENST00000416108 LSMEM2Q8N112 164 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 CDYL2Q8N8U2 506 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 LMNTD1Q8N9Z9 388 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 LINC01555Q8NAE3 123 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 OR52B6Q8NGF0 335 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 METTL6Q8TCB7 284 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 NEIL2Q969S2 332 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 PTCD3Q96EY7 689 aaKnown RBP8.11□□□□□ -1.11
RBM39-208ENST00000416108 ZNF317Q96PQ6 595 aaPredicted RBP8.11□□□□□ -1.11
RBM39-208ENST00000416108 CDK15Q96Q40 435 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 OR4K3Q96R72 315 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 SORT1Q99523 831 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 AIF1LQ9BQI0 150 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 MENTQ9BUN1 341 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 EFCAB11Q9BUY7 163 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 SLC29A3Q9BZD2 475 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 C20orf27Q9GZN8 174 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 ELOVL6Q9H5J4 265 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 RABEP2Q9H5N1 569 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 SYNDIG1Q9H7V2 258 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 ZNF395Q9H8N7 513 aaPredicted RBP8.11□□□□□ -1.11
RBM39-208ENST00000416108 ZBTB26Q9HCK0 441 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 NPHS2Q9NP85 383 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 SEMA4GQ9NTN9 838 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 DNAAF2Q9NVR5 837 aaKnown RBP8.11□□□□□ -1.11
RBM39-208ENST00000416108 PNPOQ9NVS9 261 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 PSD3Q9NYI0 1048 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 FTSJ1Q9UET6 329 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 ZDHHC2Q9UIJ5 367 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 SNX6Q9UNH7 406 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 TRAF6Q9Y4K3 522 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 RNF215Q9Y6U7 377 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 BPTFQ12830 3046 aa8.11□□□□□ -1.11
RBM39-208ENST00000416108 ASXL3Q9C0F0 2248 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 A0A0J9YY10 115 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 TRIM38O00635 465 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 NDUFAB1O14561 156 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 HDAC3O15379 428 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 SKAP2O75563 359 aaPredicted RBP8.1□□□□□ -1.11
RBM39-208ENST00000416108 LDOC1O95751 146 aaPredicted RBP8.1□□□□□ -1.11
RBM39-208ENST00000416108 GIMD1P0DJR0 217 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 PCNAP12004 261 aa8.1□□□□□ -1.11
RBM39-208ENST00000416108 JUPP14923 745 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms