RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LDB2O43679 373 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 NUAK1O60285 661 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 NOBOXO60393 691 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 TRIM16O95361 564 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 GASTP01350 101 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 KRT14P02533 472 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PYGLP06737 847 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 IVLP07476 585 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 APRTP07741 180 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 F7P08709 466 aaPredicted RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 JUPP14923 745 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 BRAFP15056 766 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 TEAD1P28347 426 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 AKT1P31749 480 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 FDFT1P37268 417 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 COILP38432 576 aaPredicted RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 MAPK9P45984 424 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 ZNF140P52738 457 aaPredicted RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 CTSCP53634 463 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 DRG2P55039 364 aaKnown RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 OR1D5P58170 312 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 DCDC1P59894 354 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 CCL7P80098 99 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 MRPS25P82663 173 aaKnown RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 TMEM115Q12893 351 aaPredicted RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 ILF3Q12906 894 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS41-205ENST00000414632 GPS1Q13098 491 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 MSLNQ13421 630 aaPredicted RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 PEX6Q13608 980 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 DAG1Q14118 895 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 TAF1AQ15573 450 aaPredicted RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 KCNMB1Q16558 191 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 INSCQ1MX18 579 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 AMZ1Q400G9 498 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PYCR3Q53H96 274 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 ZRANB3Q5FWF4 1079 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 FNBP1LQ5T0N5 605 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 GPRC6AQ5T6X5 926 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 NKAIN2Q5VXU1 208 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 ANKRD22Q5VYY1 191 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 CCDC137Q6PK04 289 aaKnown RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 GPR155Q7Z3F1 870 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 CLEC14AQ86T13 490 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PPP1R3BQ86XI6 285 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 TRAPPC5Q8IUR0 188 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 NAGSQ8N159 534 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 SDR16C5Q8N3Y7 309 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 ARL10Q8N8L6 244 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 RASGEF1AQ8N9B8 481 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 MDM1Q8TC05 714 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 ZNF398Q8TD17 642 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 BRSK1Q8TDC3 778 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 MAIP1Q8WWC4 291 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 GFM2Q969S9 779 aaKnown RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 MAGOHBQ96A72 148 aaKnown RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 ARL8AQ96BM9 186 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 LRRC45Q96CN5 670 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 RTP4Q96DX8 246 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PBKQ96KB5 322 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 ZNF778Q96MU6 729 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PLEKHG4BQ96PX9 1271 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 FRMD8P1Q9BZ68 369 aaPredicted RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 DDX47Q9H0S4 455 aaKnown RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 ABCG4Q9H172 646 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 TRABDQ9H4I3 376 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PRDM8Q9NQV8 689 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 KLC4Q9NSK0 619 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 TRNAU1APQ9NX07 287 aaKnown RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 HACD3Q9P035 362 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PAK5Q9P286 719 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 NFKBIL1Q9UBC1 381 aaPredicted RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 TBC1D29Q9UFV1 150 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 SLC23A2Q9UGH3 650 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 SLC2A6Q9UGQ3 507 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 FEZ2Q9UHY8 353 aaPredicted RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 CRLS1Q9UJA2 301 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 SNX12Q9UMY4 172 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 PSMD13Q9UNM6 376 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 DRG1Q9Y295 367 aaKnown RBP4.78□□□□□ -1.64
VPS41-205ENST00000414632 PCDHGB3Q9Y5G1 929 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 RNF215Q9Y6U7 377 aa4.78□□□□□ -1.64
VPS41-205ENST00000414632 KMT2BQ9UMN6 2715 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 ACACBO00763 2458 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 CELSR3Q9NYQ7 3312 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 PRAMEF33A0A0G2JMD5 474 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 CCDC162PA2VCL2 907 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 EME2A4GXA9 379 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 PDZK1P1A8MUH7 402 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 PPM1DO15297 605 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 PSMD3O43242 534 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 AVILO75366 819 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 CSO75390 466 aaKnown RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 CYP7B1O75881 506 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 SRP72O76094 671 aaKnown RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 TMEM63AO94886 807 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 CDK14O94921 469 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 MT-CO3P00414 261 aa4.77□□□□□ -1.65
VPS41-205ENST00000414632 RPLP0P05388 317 aaKnown RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 ZNF7P17097 686 aaPredicted RBP4.77□□□□□ -1.65
VPS41-205ENST00000414632 CD53P19397 219 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms