RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GABRB3P28472 473 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 VSX2P58304 361 aaPredicted RBP10.75□□□□□ -0.69
RFFL-204ENST00000414419 IL2P60568 153 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 CKAP4Q07065 602 aaKnown RBP10.75□□□□□ -0.69
RFFL-204ENST00000414419 MGAT5Q09328 741 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 NCF4Q15080 339 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 RBM20Q5T481 1227 aaKnown RBP10.75□□□□□ -0.69
RFFL-204ENST00000414419 YOD1Q5VVQ6 348 aaPredicted RBP10.75□□□□□ -0.69
RFFL-204ENST00000414419 FAM45BPQ6NSW5 357 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 TRMT10BQ6PF06 316 aaKnown RBP10.75□□□□□ -0.69
RFFL-204ENST00000414419 PAQR3Q6TCH7 311 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 CYHR1Q6ZMK1 362 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 TTLL10Q6ZVT0 673 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 PRICKLE2Q7Z3G6 844 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 PPFIBP2Q8ND30 876 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 C9orf43Q8TAL5 461 aaPredicted RBP10.75□□□□□ -0.69
RFFL-204ENST00000414419 FAM45AQ8TCE6 357 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 PYROXD1Q8WU10 500 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 ZNF480Q8WV37 535 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 LINGO1Q96FE5 620 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 DPH7Q9BTV6 452 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 TRIM54Q9BYV2 358 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 STARD5Q9NSY2 213 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 NSMCE4AQ9NXX6 385 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 ANKMY1Q9P2S6 941 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 TAC3Q9UHF0 121 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 TLN1Q9Y490 2541 aaKnown RBP10.75□□□□□ -0.69
RFFL-204ENST00000414419 SMG1Q96Q15 3661 aaKnown RBP10.74□□□□□ -0.69
RFFL-204ENST00000414419 E7ENX8 843 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 E7ESA3 106 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 SLC16A5O15375 505 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 SLC28A2O43868 658 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 EIF2S1P05198 315 aaKnown RBP10.74□□□□□ -0.69
RFFL-204ENST00000414419 CTSBP07858 339 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 SAT1P21673 171 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 FOLR3P41439 243 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 PMS2P54278 862 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 CDKN2DP55273 166 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 ABATP80404 500 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 TAP2Q03519 686 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 PRDX1Q06830 199 aaKnown RBP10.74□□□□□ -0.69
RFFL-204ENST00000414419 SP140Q13342 867 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 IL10RAQ13651 578 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 FRG1Q14331 258 aaKnown RBP10.74□□□□□ -0.69
RFFL-204ENST00000414419 NKAIN1Q4KMZ8 207 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 WASHC2DQ5SRD0 308 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 HECTD2Q5U5R9 776 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 ICE2Q659A1 982 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 ZNF385CQ66K41 422 aaPredicted RBP10.74□□□□□ -0.69
RFFL-204ENST00000414419 FAM198BQ6UWH4 519 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 CAPN12Q6ZSI9 719 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 ADCK2Q7Z695 626 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 RAB43Q86YS6 212 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 CDKL2Q92772 493 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 ABHD17AQ96GS6 310 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 CCDC138Q96M89 665 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 C16orf45Q96MC5 204 aaPredicted RBP10.74□□□□□ -0.69
RFFL-204ENST00000414419 GBP5Q96PP8 586 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 ZFYVE21Q9BQ24 234 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 PARVBQ9HBI1 364 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 SAYSD1Q9NPB0 183 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 ZNF71Q9NQZ8 489 aaPredicted RBP10.74□□□□□ -0.69
RFFL-204ENST00000414419 ACSS2Q9NR19 701 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 CUTCQ9NTM9 273 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 TXNDC16Q9P2K2 825 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 SLC17A6Q9P2U8 582 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 KLK4Q9Y5K2 254 aa10.74□□□□□ -0.69
RFFL-204ENST00000414419 BOD1L1Q8NFC6 3051 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 ZNF462Q96JM2 2506 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 A0A1B0GX78 115 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 HYKKA2RU49 373 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 OR2A25A4D2G3 310 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 ARGFXA6NJG6 315 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 DSCR3O14972 297 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 TP73O15350 636 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 EIF3HO15372 352 aaKnown RBP eCLIP10.73□□□□□ -0.69
RFFL-204ENST00000414419 CTSVO60911 334 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 URI1O94763 535 aaPredicted RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 CAPN1P07384 714 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 SLC12A2P55011 1212 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 RRADP55042 308 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 PLTPP55058 493 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 TIAL1Q01085 375 aaKnown RBP eCLIP10.73□□□□□ -0.69
RFFL-204ENST00000414419 CAV1Q03135 178 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 ILF2Q12905 390 aaKnown RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 SSPNQ14714 243 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 SLC9A5Q14940 896 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 FASTKD3Q14CZ7 662 aaKnown RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 LACTB2Q53H82 288 aaPredicted RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 FRMPD2BQ6IN97 320 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 STRA8Q7Z7C7 330 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 SLC26A11Q86WA9 606 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 PTRH1Q86Y79 214 aaKnown RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 APLFQ8IW19 511 aaPredicted RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 ZNF592Q92610 1267 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 RERGQ96A58 199 aaPredicted RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 ALKBH8Q96BT7 664 aaKnown RBP10.73□□□□□ -0.69
RFFL-204ENST00000414419 VPS39Q96JC1 886 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 IP6K3Q96PC2 410 aa10.73□□□□□ -0.69
RFFL-204ENST00000414419 PLCD4Q9BRC7 762 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms