RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SPOPLQ6IQ16 392 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PLEKHA7Q6IQ23 1121 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PYHIN1Q6K0P9 492 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 MRNIPQ6NTE8 343 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 DUS1LQ6P1R4 473 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 FBXO46Q6PJ61 603 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SLC39A5Q6ZMH5 540 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SLC26A9Q7LBE3 791 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 OTOP1Q7RTM1 612 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CYP4Z1Q86W10 505 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF575Q86XF7 245 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ARHGEF19Q8IW93 802 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CCDC60Q8IWA6 550 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZC3H7AQ8IWR0 971 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 LRRC8AQ8IWT6 810 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 BBS7Q8IWZ6 715 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 KLHL7Q8IXQ5 586 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 RCOR2Q8IZ40 523 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SELENOHQ8IZQ5 122 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PDIK1LQ8N165 341 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 THEM5Q8N1Q8 247 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF786Q8N393 782 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 NECAB1Q8N987 351 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 DTX3Q8N9I9 347 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 L3MBTL4Q8NA19 623 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 FAM47BQ8NA70 645 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CAMKVQ8NCB2 501 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CCNYQ8ND76 341 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 GPRC5AQ8NFJ5 357 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 OR4K14Q8NGD5 310 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 OR13F1Q8NGS4 319 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZCCHC10Q8TBK6 192 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 DCAF4Q8WV16 495 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SELENOMQ8WWX9 145 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 HAS2Q92819 552 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PHF21AQ96BD5 680 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 NMD3Q96D46 503 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 DAZAP1Q96EP5 407 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 LRIG1Q96JA1 1093 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 DNAJC1Q96KC8 554 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SNX22Q96L94 193 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 TEFMQ96QE5 360 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CITED1Q99966 193 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF747Q9BV97 191 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SSBP3Q9BWW4 388 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 DGCR6LQ9BY27 220 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 MRPL13Q9BYD1 178 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZMYND12Q9H0C1 365 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 OPN3Q9H1Y3 402 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 P2RY12Q9H244 342 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 TP63Q9H3D4 680 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 LRRN3Q9H3W5 708 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CHODLQ9H9P2 273 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SMURF2Q9HAU4 748 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 RNPEPL1Q9HAU8 725 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 GPN1Q9HCN4 374 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CCNB1IP1Q9NPC3 277 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CHST11Q9NPF2 352 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 KLHL1Q9NR64 748 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 CHRAC1Q9NRG0 131 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SAMSN1Q9NSI8 373 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF701Q9NV72 531 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 HIF1ANQ9NWT6 349 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SLCO1C1Q9NYB5 712 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 WSB2Q9NYS7 404 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PTTG2Q9NZH5 202 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF70Q9UC06 446 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 DAPK2Q9UIK4 370 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 NUP50Q9UKX7 468 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 SLC12A4Q9UP95 1085 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 PTRH2Q9Y3E5 179 aaKnown RBP3.53□□□□□ -1.84
SF3B1-203ENST00000414174 RAD54BQ9Y620 910 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 ERICH3Q5RHP9 1530 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 WDR7Q9Y4E6 1490 aa3.53□□□□□ -1.84
SF3B1-203ENST00000414174 NCAPD2Q15021 1401 aa3.53□□□□□ -1.85
SF3B1-203ENST00000414174 RAB3GAP2Q9H2M9 1393 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 CCDC187A0A096LP49 1063 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 A0A0J9YVX5 310 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 A0A0U1RQJ8 604 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 A0A1B0GUH1 482 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 GNG14A0A1W2PPG7 69 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 OR2A25A4D2G3 310 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 OR2AG2A6NM03 316 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 MARCH11A6NNE9 402 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 WASHC1A8K0Z3 465 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 BTBD18B2RXH4 712 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KCNJ18B7U540 433 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 WASH3PC4AMC7 463 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 ATP6V1G2-DDX39BF2Z307 99 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 H7C4K7 107 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 STX16O14662 325 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KIAA0391O15091 583 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KLK10O43240 276 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 PSMD3O43242 534 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 BUD23O43709 281 aaKnown RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 TLX3O43711 291 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 LANCL1O43813 399 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 KLK8O60259 260 aa3.52□□□□□ -1.85
SF3B1-203ENST00000414174 SNNO75324 88 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-203ENST00000414174 TULP3O75386 442 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms