RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 NPAS4Q8IUM7 802 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 APCDD1Q8J025 514 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 CBARPQ8N350 705 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 TCAIMQ8N3R3 496 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 EGLN2Q96KS0 407 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 ATP13A3Q9H7F0 1226 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 CCNB1IP1Q9NPC3 277 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 ATAD3AQ9NVI7 634 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 PDP1Q9P0J1 537 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 BRCA2P51587 3418 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 FAM20BO75063 409 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 DIRAS1O95057 198 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 FADS2O95864 444 aaKnown RBP18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 MT-ND2P03891 347 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 HIST1H2AGP0C0S8 130 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 HIST1H2ADP20671 130 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 VBP1P61758 197 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 BOP1Q14137 746 aaKnown RBP18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 CLCA4Q14CN2 919 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 SYT6Q5T7P8 510 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 TSPAN33Q86UF1 283 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 ITPKCQ96DU7 683 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 HIST1H2AHQ96KK5 128 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 PANX1Q96RD7 426 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 HIST1H2AJQ99878 128 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 H2AFJQ9BTM1 129 aa18.47■□□□□ 0.55
TNFRSF8-202ENST00000413146 KRBA1A5PL33 1030 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 TMEM247A6NEH6 219 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 TMEM88BA6NKF7 163 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 CLIC1O00299 241 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 FPGTO14772 594 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 RGS10O43665 173 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 NBNO60934 754 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 EPN2O95208 641 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 LATS1O95835 1130 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 SLC10A3P09131 477 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 ACVR2AP27037 513 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 CD6P30203 668 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 MASP1P48740 699 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 HNRNPFP52597 415 aaKnown RBP18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 MVKQ03426 396 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 SREBF2Q12772 1141 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 DUOXA1Q1HG43 343 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 VMACQ2NL98 169 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 LAIR1Q6GTX8 287 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 SLC22A15Q8IZD6 547 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 GPR26Q8NDV2 337 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 CSGALNACT1Q8TDX6 532 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 COPS8Q99627 209 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 ASPSCR1Q9BZE9 553 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 KRT84Q9NSB2 600 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 ZDHHC3Q9NYG2 299 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 SAMHD1Q9Y3Z3 626 aaKnown RBP18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 CASP8AP2Q9UKL3 1982 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 CA12O43570 354 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 ADAM23O75077 832 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 JRKO75564 520 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 SELPP16109 830 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 AMD1P17707 334 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 ENGP17813 658 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 CCR7P32248 378 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 TRPC1P48995 793 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 GBX1Q14549 363 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 ERICH5Q6P6B1 374 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 GALNT10Q86SR1 603 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 ATG16L2Q8NAA4 619 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 MINDY2Q8NBR6 621 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 ZNF300Q96RE9 604 aaPredicted RBP18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 REXO4Q9GZR2 422 aaKnown RBP18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 ABCG8Q9H221 673 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 KLHL42Q9P2K6 505 aa18.46■□□□□ 0.55
TNFRSF8-202ENST00000413146 NPIPB15A6NHN6 443 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 HOXA2O43364 376 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 FKBP9O95302 570 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 IGSF6O95976 241 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 C8GP07360 202 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 PRPS1L1P21108 318 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 SERPINA4P29622 427 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 GRK3P35626 688 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 VLDLRP98155 873 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 SEMG2Q02383 582 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 MAD2L1BPQ15013 274 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 INAQ16352 499 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 PAGE2BQ5JRK9 111 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 KIAA1841Q6NSI8 718 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 NOXRED1Q6NXP6 359 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 VTCN1Q7Z7D3 282 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 ZZZ3Q8IYH5 903 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 PGBD3Q8N328 593 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 L3MBTL4Q8NA19 623 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 PYCR2Q96C36 320 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 ASIC4Q96FT7 647 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 EBPLQ9BY08 206 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 FBXO8Q9NRD0 319 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 NDRG4Q9ULP0 352 aaKnown RBP18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 PLXNB3Q9ULL4 1909 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 AGAP14A8MT82 685 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 ACPPP15309 386 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 KDELR2P33947 212 aa18.45■□□□□ 0.54
TNFRSF8-202ENST00000413146 HSPA14Q0VDF9 509 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms