RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 VSX2P58304 361 aaPredicted RBP12.61□□□□□ -0.39
SSB-203ENST00000413002 CDC20Q12834 499 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 ARHGAP19Q14CB8 494 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 DEFB109BQ30KR1 87 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 KBTBD12Q3ZCT8 623 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 THEMIS2Q5TEJ8 643 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 SLC26A11Q86WA9 606 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 PLD3Q8IV08 490 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 TMEM151BQ8IW70 566 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 LRRC56Q8IYG6 542 aaPredicted RBP12.61□□□□□ -0.39
SSB-203ENST00000413002 OR4N4Q8N0Y3 316 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 SPATA6LQ8N4H0 392 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 PPM1NQ8N819 430 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 EXD3Q8N9H8 876 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 FBXO15Q8NCQ5 510 aaPredicted RBP12.61□□□□□ -0.39
SSB-203ENST00000413002 MNS1Q8NEH6 495 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 MCOLN3Q8TDD5 553 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 FBF1Q8TES7 1133 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 ANKRD49Q8WVL7 239 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 MRRFQ96E11 262 aaKnown RBP12.61□□□□□ -0.39
SSB-203ENST00000413002 VPS39Q96JC1 886 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 RHOJQ9H4E5 214 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 ACTL8Q9H568 366 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 SYNPO2LQ9H987 977 aa12.61□□□□□ -0.39
SSB-203ENST00000413002 MRPS30Q9NP92 439 aaKnown RBP12.61□□□□□ -0.39
SSB-203ENST00000413002 INTS7Q9NVH2 962 aaKnown RBP12.61□□□□□ -0.39
SSB-203ENST00000413002 CUEDC1Q9NWM3 386 aaPredicted RBP12.61□□□□□ -0.39
SSB-203ENST00000413002 UTP6Q9NYH9 597 aaKnown RBP12.61□□□□□ -0.39
SSB-203ENST00000413002 SNRNP200O75643 2136 aaKnown RBP12.61□□□□□ -0.39
SSB-203ENST00000413002 KALRNO60229 2985 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 CDC14CA4D256 554 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 NPEPPSL1A6NEC2 478 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 FAM159BA6NKW6 160 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 KIF2AO00139 706 aaPredicted RBP12.6□□□□□ -0.39
SSB-203ENST00000413002 EIF3FO00303 357 aaPredicted RBP12.6□□□□□ -0.39
SSB-203ENST00000413002 CDC7O00311 574 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 PHGDHO43175 533 aaKnown RBP12.6□□□□□ -0.39
SSB-203ENST00000413002 GUCA1CO95843 209 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 STATHP02808 62 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 EIF2S1P05198 315 aaKnown RBP12.6□□□□□ -0.39
SSB-203ENST00000413002 C8GP07360 202 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 ALAS2P22557 587 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 NAE1Q13564 534 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 ZXDCQ2QGD7 858 aaPredicted RBP12.6□□□□□ -0.39
SSB-203ENST00000413002 ICE2Q659A1 982 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 FBXO42Q6P3S6 717 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 AGTRAPQ6RW13 159 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 ADCK2Q7Z695 626 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 METTL27Q8N6F8 245 aaPredicted RBP12.6□□□□□ -0.39
SSB-203ENST00000413002 ENDOVQ8N8Q3 282 aaKnown RBP12.6□□□□□ -0.39
SSB-203ENST00000413002 LRRN4CLQ8ND94 238 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 SEC14L1Q92503 715 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 CDKL2Q92772 493 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 ZUFSPQ96AP4 578 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 MED8Q96G25 268 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 SELENOSQ9BQE4 189 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 ARHGAP9Q9BRR9 750 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 MCMBPQ9BTE3 642 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 EFHD1Q9BUP0 239 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 CHRNA10Q9GZZ6 450 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 PARVBQ9HBI1 364 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 NDOR1Q9UHB4 597 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 KCND3Q9UK17 655 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 CORO1CQ9ULV4 474 aaPredicted RBP12.6□□□□□ -0.39
SSB-203ENST00000413002 SH2B3Q9UQQ2 575 aa12.6□□□□□ -0.39
SSB-203ENST00000413002 FARSAQ9Y285 508 aaKnown RBP12.6□□□□□ -0.39
SSB-203ENST00000413002 OR2A25A4D2G3 310 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 EIF4E1BA6NMX2 242 aaKnown RBP12.59□□□□□ -0.39
SSB-203ENST00000413002 TARM1B6A8C7 271 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 CREG1O75629 220 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 TUBB4AP04350 444 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 CAPN1P07384 714 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 ZNF37AP17032 561 aaPredicted RBP12.59□□□□□ -0.39
SSB-203ENST00000413002 PTPN4P29074 926 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 HSD17B2P37059 387 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 TBPL1P62380 186 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 RPS15P62841 145 aaKnown RBP12.59□□□□□ -0.39
SSB-203ENST00000413002 PRDX1Q06830 199 aaKnown RBP12.59□□□□□ -0.39
SSB-203ENST00000413002 ZC3H12BQ5HYM0 836 aaKnown RBP12.59□□□□□ -0.39
SSB-203ENST00000413002 WASHC2DQ5SRD0 308 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 MLIPQ5VWP3 458 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 ZNF385CQ66K41 422 aaPredicted RBP12.59□□□□□ -0.39
SSB-203ENST00000413002 LRRC8EQ6NSJ5 796 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 TLDC1Q6P9B6 456 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 FAM198BQ6UWH4 519 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 ZNF517Q6ZMY9 492 aaPredicted RBP12.59□□□□□ -0.39
SSB-203ENST00000413002 TTLL10Q6ZVT0 673 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.59□□□□□ -0.39
SSB-203ENST00000413002 PYCR2Q96C36 320 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 CCDC138Q96M89 665 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 LRFN5Q96NI6 719 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 GBP5Q96PP8 586 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 PLCD4Q9BRC7 762 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 NDC1Q9BTX1 674 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 GPAMQ9HCL2 828 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 ARL15Q9NXU5 204 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 NSMCE4AQ9NXX6 385 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 TXNDC16Q9P2K2 825 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 AP1M2Q9Y6Q5 423 aa12.59□□□□□ -0.39
SSB-203ENST00000413002 ZNF839A8K0R7 811 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms