RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 RPS12P25398 132 aaKnown RBP13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 DCDC1P59894 354 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 ISL1P61371 349 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 HIST2H2AA3Q6FI13 130 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 KLHL6Q8WZ60 621 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 CSF3RQ99062 836 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 MROH8Q9H579 483 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 CPA4Q9UI42 421 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 CLCA2Q9UQC9 943 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 SPIN1Q9Y657 262 aaPredicted RBP13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 HOXC11O43248 304 aaPredicted RBP13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 ESR1P03372 595 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 GHRHRQ02643 423 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 CREB5Q02930 508 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 DALRD3Q5D0E6 543 aaKnown RBP13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 EEF1AKMT1Q8WVE0 214 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 AMBRA1Q9C0C7 1298 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 DCAF13Q9NV06 445 aaKnown RBP13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 EIF3KQ9UBQ5 218 aaKnown RBP13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 NCKAP1Q9Y2A7 1128 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 RPL36Q9Y3U8 105 aaKnown RBP13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 LOXHD1Q8IVV2 1947 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
CLTCL1-201ENST00000412649 INMT-MINDY4F8WBC2 141 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 GADD45GO95257 159 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 ATF6P18850 670 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 LGALS3BPQ08380 585 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 HNRNPA0Q13151 305 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 PTPRCAPQ14761 206 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 PCBP1Q15365 356 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 PLA2G4EQ3MJ16 856 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 OR4A15Q8NGL6 344 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 NETO1Q8TDF5 533 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 GTPBP2Q9BX10 602 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 SOWAHBA6NEL2 793 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 UGT2B10P36537 528 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 OR3A3P47888 321 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 ARSDP51689 593 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 SRSF11Q05519 484 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 FADDQ13158 208 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 BOP1Q14137 746 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 GTF2IRD2BQ6EKJ0 949 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 OR4F3Q6IEY1 312 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 ZNF438Q7Z4V0 828 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 GTF2IRD2Q86UP8 949 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 DPP10Q8N608 796 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 C11orf24Q96F05 449 aaPredicted RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 ARPC5LQ9BPX5 153 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 TAS2R7Q9NYW3 318 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 MARCH2Q9P0N8 246 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 MAN2B2Q9Y2E5 1009 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 CTDSP2O14595 271 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 IRAK2O43187 625 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 TCF3P15923 654 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 PCSK2P16519 638 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 TYMPP19971 482 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 EFNA1P20827 205 aaPredicted RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 DDOSTP39656 456 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 ALDH9A1P49189 494 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 FAM214AQ32MH5 1076 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 CATSPEREQ5SY80 951 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 GDPD3Q7L5L3 318 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 TIGD4Q8IY51 512 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 POF1BQ8WVV4 589 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 MED8Q96G25 268 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 HYLS1Q96M11 299 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 CAMKK2Q96RR4 588 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 MND1Q9BWT6 205 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 KCNH6Q9H252 994 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 PIM2Q9P1W9 311 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 FKBPLQ9UIM3 349 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 ARNTLO00327 626 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 WNT9AO14904 365 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 SLC16A6O15403 523 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 ARIH2O95376 493 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 ALDH2P05091 517 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 PAICSP22234 425 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 CREMQ03060 361 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 TBCEQ15813 527 aaPredicted RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 LRRC26Q2I0M4 334 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 DPY19L1Q2PZI1 675 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 TRIM71Q2Q1W2 868 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 ZNF362Q5T0B9 420 aaPredicted RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 LRRC66Q68CR7 880 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 RANBP10Q6VN20 620 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 RBFAQ8N0V3 343 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 TEFMQ96QE5 360 aaKnown RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 TTYH1Q9H313 450 aaPredicted RBP13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 IL1RAPQ9NPH3 570 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 MAU2Q9Y6X3 613 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 A3GALT2U3KPV4 340 aa13.54□□□□□ -0.24
CLTCL1-201ENST00000412649 A0A096LPI6 279 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 IRGMA1A4Y4 181 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 FXYD1O00168 92 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 IFNW1P05000 195 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 PFKLP17858 780 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 C21orf33P30042 268 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 TNFSF8P32971 234 aa13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 RPS5P46782 204 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-201ENST00000412649 ARCN1P48444 511 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms