RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 FRG2BQ96QU4 278 aa23.11■■□□□ 1.29
PMS1-205ENST00000409985 SOX17Q9H6I2 414 aaPredicted RBP23.11■■□□□ 1.29
PMS1-205ENST00000409985 CDC14AQ9UNH5 594 aa23.11■■□□□ 1.29
PMS1-205ENST00000409985 SAMD4AQ9UPU9 718 aaKnown RBP23.11■■□□□ 1.29
PMS1-205ENST00000409985 AP1M2Q9Y6Q5 423 aa23.11■■□□□ 1.29
PMS1-205ENST00000409985 SLC16A6O15403 523 aa23.1■■□□□ 1.29
PMS1-205ENST00000409985 NOL3O60936 208 aaKnown RBP23.1■■□□□ 1.29
PMS1-205ENST00000409985 CYP2A6P11509 494 aaPredicted RBP23.1■■□□□ 1.29
PMS1-205ENST00000409985 SHMT2P34897 504 aa23.1■■□□□ 1.29
PMS1-205ENST00000409985 CTSOP43234 321 aaPredicted RBP23.1■■□□□ 1.29
PMS1-205ENST00000409985 STK19P49842 368 aaPredicted RBP23.1■■□□□ 1.29
PMS1-205ENST00000409985 ZXDCQ2QGD7 858 aaPredicted RBP23.1■■□□□ 1.29
PMS1-205ENST00000409985 LILRA6Q6PI73 481 aa23.1■■□□□ 1.29
PMS1-205ENST00000409985 B4GALNT2Q8NHY0 566 aa23.1■■□□□ 1.29
PMS1-205ENST00000409985 MBOAT4Q96T53 435 aa23.1■■□□□ 1.29
PMS1-205ENST00000409985 GABARAPL1Q9H0R8 117 aa23.1■■□□□ 1.29
PMS1-205ENST00000409985 LIN28AQ9H9Z2 209 aaKnown RBP23.1■■□□□ 1.29
PMS1-205ENST00000409985 TMPRSS11EQ9UL52 423 aa23.1■■□□□ 1.29
PMS1-205ENST00000409985 GMEB1Q9Y692 573 aa23.1■■□□□ 1.29
PMS1-205ENST00000409985 PRRC2BQ5JSZ5 2229 aaKnown RBP23.1■■□□□ 1.29
PMS1-205ENST00000409985 A8MX80 341 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 BMP1P13497 986 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 RYKP34925 604 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 CA8P35219 290 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 DCTP40126 519 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 MAPK9P45984 424 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 RAD23AP54725 363 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 HSPA14Q0VDF9 509 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 GRIN2CQ14957 1233 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 ZIK1Q3SY52 487 aaPredicted RBP23.09■■□□□ 1.29
PMS1-205ENST00000409985 NEK5Q6P3R8 708 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 ERICH5Q6P6B1 374 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 DPY19L3Q6ZPD9 716 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 B4GALT6Q9UBX8 382 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 EVPLLA8MZ36 301 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 TGM5O43548 720 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 FTH1P02794 183 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 HSD3B1P14060 373 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 HSD3B2P26439 372 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 C6orf141Q5SZD1 244 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 GDPD4Q6W3E5 623 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 HS6ST3Q8IZP7 471 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 CMTM8Q8IZV2 173 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 DRAXINQ8NBI3 349 aaPredicted RBP23.09■■□□□ 1.29
PMS1-205ENST00000409985 ASZ1Q8WWH4 475 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 NELL1Q92832 810 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 TBCDQ9BTW9 1192 aa23.09■■□□□ 1.29
PMS1-205ENST00000409985 HELZP42694 1942 aaKnown RBP23.08■■□□□ 1.29
PMS1-205ENST00000409985 SLCO2B1O94956 709 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 ITGAMP11215 1152 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 DDX6P26196 483 aaKnown RBP eCLIP23.08■■□□□ 1.29
PMS1-205ENST00000409985 GTDC1Q4AE62 458 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 GPR107Q5VW38 600 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 NOXRED1Q6NXP6 359 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 NETO1Q8TDF5 533 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 FBLIM1Q8WUP2 373 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 ATL1Q8WXF7 558 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 NCLNQ969V3 563 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 MTFMTQ96DP5 389 aaKnown RBP23.08■■□□□ 1.29
PMS1-205ENST00000409985 SPATA9Q9BWV2 254 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 ZDHHC6Q9H6R6 413 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 SLC6A13Q9NSD5 602 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 PPT2Q9UMR5 302 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 ORC6Q9Y5N6 252 aa23.08■■□□□ 1.29
PMS1-205ENST00000409985 UNC80Q8N2C7 3258 aa23.08■■□□□ 1.28
PMS1-205ENST00000409985 RFXANKO14593 260 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 SERPINA1P01009 418 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 ELK4P28324 431 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 VIPR1P32241 457 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 KIR3DL1P43629 444 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 RAB15P59190 212 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 DUOXA1Q1HG43 343 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 SHQ1Q6PI26 577 aaKnown RBP23.07■■□□□ 1.28
PMS1-205ENST00000409985 DET1Q7L5Y6 550 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 CHDHQ8NE62 594 aaPredicted RBP23.07■■□□□ 1.28
PMS1-205ENST00000409985 OR8J2Q8NGG1 315 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 ZNF566Q969W8 418 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 PPP1R14BQ96C90 147 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 SLC46A2Q9BY10 475 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 AMBRA1Q9C0C7 1298 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 GPN2Q9H9Y4 310 aaPredicted RBP23.07■■□□□ 1.28
PMS1-205ENST00000409985 FAM120CQ9NX05 1096 aaKnown RBP23.07■■□□□ 1.28
PMS1-205ENST00000409985 HSPE1-MOB4S4R3N1 261 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 TSPAN11A1L157 253 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 SOBPA7XYQ1 873 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 ATE1O95260 518 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 FGF19O95750 216 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 UGT2B4P06133 528 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 GSTM1P09488 218 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 GSTM4Q03013 218 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 DNAJC14Q6Y2X3 702 aaPredicted RBP23.07■■□□□ 1.28
PMS1-205ENST00000409985 PHACTR4Q8IZ21 702 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 CPA6Q8N4T0 437 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 CLHC1Q8NHS4 586 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 RAB2BQ8WUD1 216 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 P2RY13Q9BPV8 354 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 FAM83DQ9H4H8 585 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 SMURF2Q9HAU4 748 aa23.07■■□□□ 1.28
PMS1-205ENST00000409985 THG1LQ9NWX6 298 aaKnown RBP23.07■■□□□ 1.28
PMS1-205ENST00000409985 ERVW-1Q9UQF0 538 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms