RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SLCO4C1Q6ZQN7 724 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 SYT12Q8IV01 421 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 LMNTD1Q8N9Z9 388 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 GATA6Q92908 595 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 GFM2Q969S9 779 aaKnown RBP20.03■□□□□ 0.8
USP39-203ENST00000409470 OR52A5Q9H2C5 316 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 RMND5AQ9H871 391 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 MBNL1Q9NR56 388 aaKnown RBP20.03■□□□□ 0.8
USP39-203ENST00000409470 SPATA6Q9NWH7 488 aaPredicted RBP20.03■□□□□ 0.8
USP39-203ENST00000409470 NEUROG3Q9Y4Z2 214 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 PCDHB3Q9Y5E6 796 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 CKAP5Q14008 2032 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 PRR23AA6NEV1 266 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 HNRNPRO43390 633 aaKnown RBP20.03■□□□□ 0.8
USP39-203ENST00000409470 GPIP06744 558 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 HSD3B1P14060 373 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 HSD3B2P26439 372 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 PNLIPRP1P54315 467 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 ACSM2AQ08AH3 577 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 RPA4Q13156 261 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 MTX3Q5HYI7 312 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 ACSM2BQ68CK6 577 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 SDE2Q6IQ49 451 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 HMBOX1Q6NT76 420 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 PDZD3Q86UT5 571 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 OR7G3Q8NG95 312 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 FAM110BQ8TC76 370 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 EZH1Q92800 747 aaPredicted RBP20.03■□□□□ 0.8
USP39-203ENST00000409470 KLK6Q92876 244 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 EGLN2Q96KS0 407 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 Q9H521 79 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 BRF2Q9HAW0 419 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 SLC23A2Q9UGH3 650 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 SCOCQ9UIL1 159 aa20.03■□□□□ 0.8
USP39-203ENST00000409470 MYO1DO94832 1006 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 PAK4O96013 591 aaPredicted RBP20.02■□□□□ 0.8
USP39-203ENST00000409470 NPPBP16860 134 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 OXTRP30559 389 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 CYP4F3Q08477 520 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 THEMIS2Q5TEJ8 643 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 GLYATQ6IB77 296 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 KIAA1211LQ6NV74 962 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 MED27Q6P2C8 311 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 ERMP1Q7Z2K6 904 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 ADGRG5Q8IZF4 528 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 PHC3Q8NDX5 983 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 TESCQ96BS2 214 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 ITCHQ96J02 903 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 FCRL1Q96LA6 429 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 SH3GL1Q99961 368 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 SGPP1Q9BX95 441 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 WDR26Q9H7D7 661 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 FBXL12Q9NXK8 326 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 MAGEL2Q9UJ55 1249 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 PPT2Q9UMR5 302 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 RUVBL1Q9Y265 456 aaKnown RBP20.02■□□□□ 0.8
USP39-203ENST00000409470 OR1A2Q9Y585 309 aa20.02■□□□□ 0.8
USP39-203ENST00000409470 ATG2BQ96BY7 2078 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 KANSL1LA0AUZ9 987 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 MAGEB17A8MXT2 336 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 HRH2P25021 359 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 NTSR1P30989 418 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 PHC1P78364 1004 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 TAP2Q03519 686 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 IRF4Q15306 451 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 CATSPEREQ5SY80 951 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 ADNP2Q6IQ32 1131 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 DNAJB8Q8NHS0 232 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 HUS1BQ8NHY5 278 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 RAD51AP1Q96B01 352 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 REPS1Q96D71 796 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 NSMCE2Q96MF7 247 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 TEX101Q9BY14 249 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 CCDC177Q9NQR7 707 aaPredicted RBP20.02■□□□□ 0.79
USP39-203ENST00000409470 TM7SF3Q9NS93 570 aa20.02■□□□□ 0.79
USP39-203ENST00000409470 CNOT11Q9UKZ1 510 aaKnown RBP20.02■□□□□ 0.79
USP39-203ENST00000409470 TCRBV5S2A0A599 114 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 TPST1O60507 370 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 SH3BGRLO75368 114 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 ERN1O75460 977 aaKnown RBP20.01■□□□□ 0.79
USP39-203ENST00000409470 GMNNO75496 209 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 PRPS1L1P21108 318 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 HSPA13P48723 471 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 SGCGQ13326 291 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 FXNQ16595 210 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 GPR180Q86V85 440 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 RIMKLAQ8IXN7 391 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 OR5AR1Q8NGP9 310 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 CDC26Q8NHZ8 85 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 TFGQ92734 400 aaPredicted RBP20.01■□□□□ 0.79
USP39-203ENST00000409470 MKRN2Q9H000 416 aaKnown RBP20.01■□□□□ 0.79
USP39-203ENST00000409470 KCNH6Q9H252 994 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 COQ10BQ9H8M1 238 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 SLC25A37Q9NYZ2 338 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 DLGAP2Q9P1A6 1054 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 ANAPC2Q9UJX6 822 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 RAB26Q9ULW5 256 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 PLAGL1Q9UM63 463 aa20.01■□□□□ 0.79
USP39-203ENST00000409470 ZFR2Q9UPR6 939 aaKnown RBP20.01■□□□□ 0.79
USP39-203ENST00000409470 SH2B3Q9UQQ2 575 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms