RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CCDC58Q4VC31 144 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 SPANXN4Q5MJ08 99 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 ZCCHC8Q6NZY4 707 aaKnown RBP15.04■□□□□ -0
LIMS2-205ENST00000409455 MSANTD2Q6P1R3 559 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 SCD5Q86SK9 330 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 C14orf80Q86SX3 495 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 FATE1Q969F0 183 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 SAMD4AQ9UPU9 718 aaKnown RBP15.04■□□□□ -0
LIMS2-205ENST00000409455 VWA8A3KMH1 1905 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 OR6C75A6NL08 312 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 LOC110117498-PIK3R3F6TDL0 507 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 EIF3FO00303 357 aaPredicted RBP15.04■□□□□ -0
LIMS2-205ENST00000409455 SEC22BO75396 215 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 VPS26AO75436 327 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 ZNF682O95780 498 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 CNPP09543 421 aaKnown RBP15.04■□□□□ -0
LIMS2-205ENST00000409455 PIRTP0C851 137 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 HAPLN1P10915 354 aaPredicted RBP15.04■□□□□ -0
LIMS2-205ENST00000409455 SLC15A1P46059 708 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 MAD2L1Q13257 205 aaPredicted RBP15.04■□□□□ -0
LIMS2-205ENST00000409455 GALNT3Q14435 633 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 ABRAXAS2Q15018 415 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 TBCEQ15813 527 aaPredicted RBP15.04■□□□□ -0
LIMS2-205ENST00000409455 PRSS36Q5K4E3 855 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 CNKSR3Q6P9H4 555 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 UMODL1-AS1Q8N2C9 162 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 ATG16L2Q8NAA4 619 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 ARRDC2Q8TBH0 407 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 PIK3R3Q92569 461 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 PSMG2Q969U7 264 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 TMEM246Q9BRR3 403 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 NMUR1Q9HB89 426 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 ABCC13Q9NSE7 274 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 ADPRHL2Q9NX46 363 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 PDP1Q9P0J1 537 aaPredicted RBP15.04■□□□□ -0
LIMS2-205ENST00000409455 TRMT6Q9UJA5 497 aaKnown RBP15.04■□□□□ -0
LIMS2-205ENST00000409455 BTBD3Q9Y2F9 522 aa15.04■□□□□ -0
LIMS2-205ENST00000409455 WASH4PA8MWX3 477 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 WBP4O75554 376 aaKnown RBP15.03■□□□□ -0
LIMS2-205ENST00000409455 DNAJA1P31689 397 aaKnown RBP15.03■□□□□ -0
LIMS2-205ENST00000409455 SOX6P35712 828 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 IL2P60568 153 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 RACK1P63244 317 aaKnown RBP15.03■□□□□ -0
LIMS2-205ENST00000409455 GTDC1Q4AE62 458 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 ARTNQ5T4W7 220 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 HORMAD1Q86X24 394 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 OR4F6Q8NGB9 312 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 TRIM63Q969Q1 353 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 ARMC5Q96C12 935 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 LINGO1Q96FE5 620 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 CDKN2AIPNLQ96HQ2 116 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 OR52E6Q96RD3 313 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 CRISPLD1Q9H336 500 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 SNX6Q9UNH7 406 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 ABCG2Q9UNQ0 655 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 GRIP1Q9Y3R0 1128 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 LYVE1Q9Y5Y7 322 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 PTPRDP23468 1912 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 M0R082 166 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 SSX4O60224 188 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 PCDHGA12O60330 932 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 FPR1P21462 350 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 EPHA2P29317 976 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 DDOSTP39656 456 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 CREMQ03060 361 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 ELAVL2Q12926 359 aaKnown RBP15.03■□□□□ -0
LIMS2-205ENST00000409455 STARD3Q14849 445 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 PTPRNQ16849 979 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 PRSS55Q6UWB4 352 aaPredicted RBP15.03■□□□□ -0
LIMS2-205ENST00000409455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.03■□□□□ -0
LIMS2-205ENST00000409455 GRPEL2Q8TAA5 225 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 TADA1Q96BN2 335 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 C8orf48Q96LL4 319 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 MYOCQ99972 504 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 SEMA3CQ99985 751 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 TTPALQ9BTX7 342 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 CCDC32Q9BV29 185 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 C11orf49Q9H6J7 331 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 QPCTLQ9NXS2 382 aa15.03■□□□□ -0
LIMS2-205ENST00000409455 A0A1W2PQH9 124 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 GOLGA8CPA6NN73 597 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 PER2O15055 1255 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 RGS14O43566 566 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 HOXA9P31269 272 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 ETV6P41212 452 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 GPR17Q13304 367 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 CACHD1Q5VU97 1274 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 ZNF517Q6ZMY9 492 aaPredicted RBP15.02■□□□□ -0
LIMS2-205ENST00000409455 SLC46A3Q7Z3Q1 461 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 SIDT2Q8NBJ9 832 aaKnown RBP15.02■□□□□ -0
LIMS2-205ENST00000409455 MYDGFQ969H8 173 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 UBE2FQ969M7 185 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 TMCO6Q96DC7 493 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 CEP19Q96LK0 163 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 CWH43Q9H720 699 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 IL1RAPQ9NPH3 570 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 TAS2R9Q9NYW1 312 aa15.02■□□□□ -0
LIMS2-205ENST00000409455 MTMR11A4FU01 709 aa15.02□□□□□ -0.01
LIMS2-205ENST00000409455 MUSKO15146 869 aa15.02□□□□□ -0.01
LIMS2-205ENST00000409455 VNN2O95498 520 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms