RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 C12orf76Q8N812 135 aaPredicted RBP24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 CHST4Q8NCG5 386 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 SGIP1Q9BQI5 828 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 MRM3Q9HC36 420 aaKnown RBP24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 ZNF304Q9HCX3 659 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 CHMP1AQ9HD42 196 aaPredicted RBP24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 AK5Q9Y6K8 562 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 LEFTY1O75610 366 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 GJB5O95377 273 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 SDC2P34741 201 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 ARHGDIBP52566 201 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 OGDHQ02218 1023 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 NXPE1Q8N323 547 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 RELTQ969Z4 430 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 RETREG1Q9H6L5 497 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 NCDNQ9UBB6 729 aa24.44■■□□□ 1.5
SPIRE1-202ENST00000409402 A0A0D9SEW6 157 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 GPR32O75388 356 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 ZNF865P0CJ78 1059 aaPredicted RBP24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 LDLRAD1Q5T700 205 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 RASSF6Q6ZTQ3 369 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 RASGEF1AQ8N9B8 481 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 ACSL5Q9ULC5 683 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 MAFFQ9ULX9 164 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 CAPN8A6NHC0 703 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 RING1Q06587 406 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 KCTD21Q4G0X4 260 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 PIGKQ92643 395 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 LRIG1Q96JA1 1093 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 FLRT1Q9NZU1 646 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 RAB26Q9ULW5 256 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 PHF24Q9UPV7 400 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 PCDHGB7Q9Y5F8 929 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 A0A1W2PQ72 361 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 PLOD3O60568 738 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 SNTA1Q13424 505 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 AGTRAPQ6RW13 159 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 AHSA2Q719I0 299 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 IQCHQ86VS3 1027 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 CBR4Q8N4T8 237 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 OR10H4Q8NGA5 316 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 OR5T3Q8NGG3 340 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 NARS2Q96I59 477 aaKnown RBP24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 DERL2Q9GZP9 239 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 NKX2-4Q9H2Z4 354 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 FAM221BA6H8Z2 402 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 GSTT1P30711 240 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 STC1P52823 247 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 RPL6Q02878 288 aaKnown RBP24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 PIM3Q86V86 326 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 KBTBD7Q8WVZ9 684 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 SMARCD2Q92925 531 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 C10orf71Q711Q0 1435 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 NALCNQ8IZF0 1738 aa24.43■■□□□ 1.5
SPIRE1-202ENST00000409402 AKAP8O43823 692 aaKnown RBP24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 PSIP1O75475 530 aaKnown RBP24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 TYRP1P17643 537 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 BCAP31P51572 246 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 GFOD2Q3B7J2 385 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 ZC3HC1Q86WB0 502 aaKnown RBP24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 ARHGAP9Q9BRR9 750 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 LRRC3Q9BY71 257 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 POLE3Q9NRF9 147 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 FZD4Q9ULV1 537 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 B4GALT2O60909 372 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 PGLSO95336 258 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 RAP2AP10114 183 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 IL12AP29459 219 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 DECR1Q16698 335 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 CLDN19Q8N6F1 224 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 HERC2P3Q9BVR0 1158 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 PCDHB3Q9Y5E6 796 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 LRRC37A3O60309 1634 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 HEPACAM2A8MVW5 462 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 GSRP00390 522 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 SERPINA3P01011 423 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 SHMT2P34897 504 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 RASGEF1BQ0VAM2 473 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 TMEM115Q12893 351 aaPredicted RBP24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 BNIP1Q12981 228 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 PERM1Q5SV97 790 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 TMIGD1Q6UXZ0 262 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 ATG14Q6ZNE5 492 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 GOLGA7Q7Z5G4 137 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 MCFD2Q8NI22 146 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 COL21A1Q96P44 957 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 TPD52L2O43399 206 aaKnown RBP24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 AHSGP02765 367 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 STATHP02808 62 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 ARCN1P48444 511 aaKnown RBP24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 LAPTM4BQ86VI4 370 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 GRHL3Q8TE85 626 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 EPYCQ99645 322 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 KCTD3Q9Y597 815 aa24.42■■□□□ 1.5
SPIRE1-202ENST00000409402 LAMTOR5O43504 91 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 CD2P06729 351 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 C12orf40Q86WS4 652 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 LRTOMTQ8WZ04 291 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 TPK1Q9H3S4 243 aa24.41■■□□□ 1.5
SPIRE1-202ENST00000409402 ZNF358Q9NW07 568 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms