RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PCNAP12004 261 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 YBX1P67809 324 aaKnown RBP18.34■□□□□ 0.53
USP39-202ENST00000409025 SFSWAPQ12872 951 aaKnown RBP18.34■□□□□ 0.53
USP39-202ENST00000409025 TRIP10Q15642 601 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 MAPKAPK3Q16644 382 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 SPANXN4Q5MJ08 99 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 NOXRED1Q6NXP6 359 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 MED27Q6P2C8 311 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 CYP2R1Q6VVX0 501 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 USP30Q70CQ3 517 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 SETD7Q8WTS6 366 aaKnown RBP18.34■□□□□ 0.53
USP39-202ENST00000409025 WDR34Q96EX3 536 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 UHRF1Q96T88 793 aaPredicted RBP18.34■□□□□ 0.53
USP39-202ENST00000409025 EFCAB11Q9BUY7 163 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 TRIM8Q9BZR9 551 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 TTYH1Q9H313 450 aaPredicted RBP18.34■□□□□ 0.53
USP39-202ENST00000409025 MUC13Q9H3R2 512 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 ALG2Q9H553 416 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 RMI1Q9H9A7 625 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 ACSL5Q9ULC5 683 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 TDRKHQ9Y2W6 561 aaKnown RBP18.34■□□□□ 0.53
USP39-202ENST00000409025 DOCK9Q9BZ29 2069 aa18.34■□□□□ 0.53
USP39-202ENST00000409025 PRSS51A0A1B0GVH4 220 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 TCRBV3S1A0A5B6 114 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 SLC35G4P0C7Q5 338 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 C1GALT1C1LP0DN25 315 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 ACADMP11310 421 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 SDC1P18827 310 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 MAT2AP31153 395 aaKnown RBP18.33■□□□□ 0.53
USP39-202ENST00000409025 IGFALSP35858 605 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 GSK3BP49841 420 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 LIPEQ05469 1076 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 PAGE2BQ5JRK9 111 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 ATG9BQ674R7 924 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 TLDC1Q6P9B6 456 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 IZUMO2Q6UXV1 221 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 CHRDL2Q6WN34 429 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 CHST15Q7LFX5 561 aaPredicted RBP18.33■□□□□ 0.53
USP39-202ENST00000409025 OR7G3Q8NG95 312 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 METTL2AQ96IZ6 378 aaKnown RBP18.33■□□□□ 0.53
USP39-202ENST00000409025 FCRL1Q96LA6 429 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 TSSK3Q96PN8 268 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 CGREF1Q99674 301 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 KCTD14Q9BQ13 255 aaPredicted RBP18.33■□□□□ 0.53
USP39-202ENST00000409025 KLHL4Q9C0H6 718 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 EHD1Q9H4M9 534 aa18.33■□□□□ 0.53
USP39-202ENST00000409025 KANSL1LA0AUZ9 987 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 DMPKQ09013 629 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 HIST2H2ACQ16777 129 aaPredicted RBP18.33■□□□□ 0.52
USP39-202ENST00000409025 CATSPEREQ5SY80 951 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 THEMIS2Q5TEJ8 643 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 LPCAT4Q643R3 524 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 HIST2H2AA3Q6FI13 130 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 TMEM126BQ8IUX1 230 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 KBTBD2Q8IY47 623 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 OR2T34Q8NGX1 318 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 OR5K2Q8NHB8 316 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 SLC5A11Q8WWX8 675 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 DUS3LQ96G46 650 aaKnown RBP18.33■□□□□ 0.52
USP39-202ENST00000409025 PPM1MQ96MI6 270 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 TMEM74Q96NL1 305 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 OR52E6Q96RD3 313 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 COPS7BQ9H9Q2 264 aaPredicted RBP18.33■□□□□ 0.52
USP39-202ENST00000409025 ACTR3BQ9P1U1 418 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 MCM8Q9UJA3 840 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 RUVBL1Q9Y265 456 aaKnown RBP18.33■□□□□ 0.52
USP39-202ENST00000409025 AP4S1Q9Y587 144 aa18.33■□□□□ 0.52
USP39-202ENST00000409025 NUMA1Q14980 2115 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 MYO1DO94832 1006 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 ACP5P13686 325 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 S100A3P33764 101 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 HSD17B2P37059 387 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 LAPTM5Q13571 262 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 EOGTQ5NDL2 527 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 C10orf62Q5T681 223 aaPredicted RBP18.32■□□□□ 0.52
USP39-202ENST00000409025 FAM124AQ86V42 546 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 IFNEQ86WN2 208 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 LMNTD1Q8N9Z9 388 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 HUS1BQ8NHY5 278 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 ASB12Q8WXK4 309 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 GTF2H4Q92759 462 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 IL17FQ96PD4 163 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 ECSITQ9BQ95 431 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 TIMM29Q9BSF4 260 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 APOOQ9BUR5 198 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 TRIT1Q9H3H1 467 aaKnown RBP18.32■□□□□ 0.52
USP39-202ENST00000409025 EGFL7Q9UHF1 273 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 PLAGL1Q9UM63 463 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 SLC17A4Q9Y2C5 497 aa18.32■□□□□ 0.52
USP39-202ENST00000409025 AQP12BA6NM10 295 aa18.31■□□□□ 0.52
USP39-202ENST00000409025 MAGEB17A8MXT2 336 aa18.31■□□□□ 0.52
USP39-202ENST00000409025 CACNB4O00305 520 aaPredicted RBP18.31■□□□□ 0.52
USP39-202ENST00000409025 SLC31A1O15431 190 aa18.31■□□□□ 0.52
USP39-202ENST00000409025 CEACAM5P06731 702 aa18.31■□□□□ 0.52
USP39-202ENST00000409025 ATP6V1B2P21281 511 aa18.31■□□□□ 0.52
USP39-202ENST00000409025 TACR1P25103 407 aa18.31■□□□□ 0.52
USP39-202ENST00000409025 PEX2P28328 305 aa18.31■□□□□ 0.52
USP39-202ENST00000409025 SLC7A1P30825 629 aa18.31■□□□□ 0.52
USP39-202ENST00000409025 GRIA3P42263 894 aa18.31■□□□□ 0.52
USP39-202ENST00000409025 CLCNKAP51800 687 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms