RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CAMK1GQ96NX5 476 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ADI1Q9BV57 179 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SPATA9Q9BWV2 254 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 RNF38Q9H0F5 515 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ZBP1Q9H171 429 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 COQ10BQ9H8M1 238 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 IL26Q9NPH9 171 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 PDP1Q9P0J1 537 aaPredicted RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 DKK3Q9UBP4 350 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 RSL24D1Q9UHA3 163 aaKnown RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 CDH7Q9ULB5 785 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 EMCNQ9ULC0 261 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 CNOT6Q9ULM6 557 aaKnown RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SCML1Q9UN30 329 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 OR10H1Q9Y4A9 318 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 A0A096LPI6 279 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 FAM92AA1XBS5 289 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 FADS2P1A8MWK0 482 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 B3GALT2O43825 422 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 EEDO75530 441 aaKnown RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 GABBR2O75899 941 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 MED26O95402 600 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 KRT8P05787 483 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 BMP7P18075 431 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 CD9P21926 228 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 HTR1EP28566 365 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 NOS3P29474 1203 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SHMT2P34897 504 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ETV3P41162 512 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 GDF5P43026 501 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 AGTR2P50052 363 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 LBX1P52954 281 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 C1QTNF8P60827 252 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ZNF630Q2M218 657 aaPredicted RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 OTUD1Q5VV17 481 aaPredicted RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ENPP7Q6UWV6 458 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 CLEC14AQ86T13 490 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ANKRD46Q86W74 232 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 GPR135Q8IZ08 494 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ZNF366Q8N895 744 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 CAMKVQ8NCB2 501 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 FAM156AQ8NDB6 213 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 TSTD1Q8NFU3 115 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SHKBP1Q8TBC3 707 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 TEX47Q8TBZ9 253 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 CD200R1Q8TD46 325 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 XAGE5Q8WWM1 108 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ITFG2Q969R8 447 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ZNF689Q96CS4 500 aaPredicted RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SLC45A3Q96JT2 553 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 PCDHAC1Q9H158 963 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 GSTO2Q9H4Y5 243 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 MVB12BQ9H7P6 319 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 NEUROD4Q9HD90 331 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 PHF11Q9UIL8 331 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 PPM1HQ9ULR3 514 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ERGIC3Q9Y282 383 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 DNMT3AQ9Y6K1 912 aaPredicted RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ARFGEF1Q9Y6D6 1849 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 GREB1LQ9C091 1923 aaPredicted RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 TTC34A8MYJ7 566 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 H0YJX3 145 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 H7C0S8 307 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 BCKDKO14874 412 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SERPINA1P01009 418 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 IGLV3-27P01718 113 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 OCM2P0CE71 109 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 OCMP0CE72 109 aaPredicted RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 HSMCR30P0CW71 290 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 C7P10643 843 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 HLA-EP13747 358 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 CDH3P22223 829 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ITGB7P26010 798 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 GTF2E2P29084 291 aaKnown RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ADARP55265 1226 aaKnown RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ARF5P84085 180 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 CDKL1Q00532 357 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SUZ12Q15022 739 aaKnown RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 TRIM16LQ309B1 348 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 LIN52Q52LA3 116 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 USP39Q53GS9 565 aaKnown RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 DENND5AQ6IQ26 1287 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 KIAA1161Q6NSJ0 714 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SLC2A7Q6PXP3 512 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 BLOC1S3Q6QNY0 202 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 NAPRTQ6XQN6 538 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 LINC00471Q8N535 108 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 C2orf73Q8N5S3 287 aaPredicted RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 AMER2Q8N7J2 671 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 TTC29Q8NA56 475 aaPredicted RBP4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ZNF540Q8NDQ6 660 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 TMIEQ8NEW7 156 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 MZB1Q8WU39 189 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 ANKRD49Q8WVL7 239 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 CANT1Q8WVQ1 401 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 NR4A3Q92570 626 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SLC38A4Q969I6 547 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 RDH12Q96NR8 316 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 KCNA7Q96RP8 456 aa4.61□□□□□ -1.67
PCDH11X-207ENST00000406881 SORT1Q99523 831 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms