RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 C11orf87Q6NUJ2 197 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 GFRALQ6UXV0 394 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 NUP54Q7Z3B4 507 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 ARHGAP22Q7Z5H3 698 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 NRARPQ7Z6K4 114 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 TMPRSS11BQ86T26 416 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 AMIGO1Q86WK6 493 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 FOXP4Q8IVH2 680 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 FAM219AQ8IW50 185 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 OR8H1Q8NGG4 311 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 SPATA22Q8NHS9 363 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 ELP5Q8TE02 316 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 SLC20A1Q8WUM9 679 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 TMED6Q8WW62 240 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 FIG4Q92562 907 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 KRT35Q92764 455 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 PROX1Q92786 737 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 ST6GALNAC6Q969X2 333 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 CDHR1Q96JP9 859 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 AK8Q96MA6 479 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 HNRNPABQ99729 332 aaKnown RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 VN1R1Q9GZP7 353 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 ZNF350Q9GZX5 532 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 CWC25Q9NXE8 425 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 ITM2BQ9Y287 266 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 IQSEC2Q5JU85 1478 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 MAPK8IP3Q9UPT6 1336 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 TECPR2O15040 1411 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 TRAV24A0A0B4J272 114 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 C13orf42A0A1B0GVH6 325 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 A0A1W2PRB8 838 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 FAM90A10PA6NDY2 464 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 KBTBD13C9JR72 458 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 PGRMC2O15173 223 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 PPIP5K2O43314 1243 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ZBTB14O43829 449 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 KINO60870 393 aaKnown RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 FCGR3BO75015 233 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 RAD51DO75771 328 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 GCNT3O95395 438 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 GH1P01241 217 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 IGHDP01880 384 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 MT-ND3P03897 115 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 CKMT2P17540 419 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ANP32AP39687 249 aaKnown RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 RPL21P46778 160 aaKnown RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ARCN1P48444 511 aaKnown RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 MTCP1P56278 107 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 KLC1Q07866 573 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ACTN3Q08043 901 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 SLC20A2Q08357 652 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 GAGE5Q13069 117 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 GAGE6Q13070 117 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 TRAF3Q13114 568 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 SMC1AQ14683 1233 aaKnown RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 NFATC4Q14934 902 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ALKBH5Q6P6C2 394 aaKnown RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 CREB3L2Q70SY1 520 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 TMEM219Q86XT9 240 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 CREBRFQ8IUR6 639 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ODF3L1Q8IXM7 274 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 NDUFAF2Q8N183 169 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ARHGAP24Q8N264 748 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 RASGEF1AQ8N9B8 481 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 NAT8LQ8N9F0 302 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 TRIML1Q8N9V2 468 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 VANGL1Q8TAA9 524 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 SPATA20Q8TB22 786 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 NTN5Q8WTR8 489 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ASB5Q8WWX0 329 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 FRAT1Q92837 279 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 RIT1Q92963 219 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 CENPTQ96BT3 561 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 EEF2KMTQ96G04 330 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ADGRG7Q96K78 797 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 SNX25Q9H3E2 840 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 TRPC7Q9HCX4 862 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 GSN-AS1Q9NRJ2 163 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 IARS2Q9NSE4 1012 aaKnown RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 SLCO1C1Q9NYB5 712 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 CNIH4Q9P003 139 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 B3GAT1Q9P2W7 334 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 TRIM17Q9Y577 477 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ARHGEF28Q8N1W1 1705 aaKnown RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 COL3A1P02461 1466 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 ATP7BP35670 1465 aa4.48□□□□□ -1.69
HMGB3P18-201ENST00000406327 EDC4Q6P2E9 1401 aaKnown RBP4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 PPIP5K1Q6PFW1 1433 aa4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 MAGEA13PA6NCF6 341 aa4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 DNAJC9-AS1A6NH13 148 aa4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 GAPDHSO14556 408 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 FLRT2O43155 660 aa4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 SELENOFO60613 162 aa4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 LDB3O75112 727 aa4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 SLC22A3O75751 556 aa4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 WISP2O76076 250 aa4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 UROSP10746 265 aa4.47□□□□□ -1.69
HMGB3P18-201ENST00000406327 TCF4P15884 667 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms