RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 KLK4Q9Y5K2 254 aa28.25■■■□□ 2.11
USP42-202ENST00000404008 CCDC187A0A096LP49 1063 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 SMIM24O75264 130 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 CREB1P16220 341 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 NPPBP16860 134 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 MAGP20916 626 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 CSTF2P33240 577 aaKnown RBP eCLIP28.24■■■□□ 2.11
USP42-202ENST00000404008 GRIA3P42263 894 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 GDF5P43026 501 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 HSPA7P48741 367 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 HSD11B2P80365 405 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 ABATP80404 500 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 SETDB1Q15047 1291 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 EXOC3L1Q86VI1 746 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 THOC6Q86W42 341 aaKnown RBP28.24■■■□□ 2.11
USP42-202ENST00000404008 CMKLR1Q99788 373 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 HAUS8Q9BT25 410 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 STMN4Q9H169 189 aaPredicted RBP28.24■■■□□ 2.11
USP42-202ENST00000404008 SLC6A20Q9NP91 592 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 MRPS30Q9NP92 439 aaKnown RBP28.24■■■□□ 2.11
USP42-202ENST00000404008 KLK13Q9UKR3 277 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 SLC22A14Q9Y267 594 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 BTRCQ9Y297 605 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 KLHL20Q9Y2M5 609 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 HEATR5BQ9P2D3 2071 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 A0A1W2PNU3 283 aaPredicted RBP28.24■■■□□ 2.11
USP42-202ENST00000404008 AGRPO00253 132 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 WDR47O94967 919 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 PROCP04070 461 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 ADRB1P08588 477 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 AGTR2P50052 363 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 EIF3IQ13347 325 aaKnown RBP28.24■■■□□ 2.11
USP42-202ENST00000404008 ZIC1Q15915 447 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 CCDC153Q494R4 210 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 RAB11FIP2Q7L804 512 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 C19orf47Q8N9M1 422 aaKnown RBP28.24■■■□□ 2.11
USP42-202ENST00000404008 ESAMQ96AP7 390 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 CD244Q9BZW8 370 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 SOHLH2Q9NX45 425 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 AKAP7Q9P0M2 348 aaPredicted RBP28.24■■■□□ 2.11
USP42-202ENST00000404008 SH2B3Q9UQQ2 575 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 LOXL2Q9Y4K0 774 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 ASB1Q9Y576 335 aa28.24■■■□□ 2.11
USP42-202ENST00000404008 IGKV1-8A0A0C4DH67 115 aa28.23■■■□□ 2.11
USP42-202ENST00000404008 PRAMEF10O60809 474 aa28.23■■■□□ 2.11
USP42-202ENST00000404008 SPAG7O75391 227 aa28.23■■■□□ 2.11
USP42-202ENST00000404008 STK16O75716 305 aa28.23■■■□□ 2.11
USP42-202ENST00000404008 D2HGDHQ8N465 521 aa28.23■■■□□ 2.11
USP42-202ENST00000404008 ZUFSPQ96AP4 578 aa28.23■■■□□ 2.11
USP42-202ENST00000404008 C12orf65Q9H3J6 166 aaKnown RBP28.23■■■□□ 2.11
USP42-202ENST00000404008 ACTL7BQ9Y614 415 aa28.23■■■□□ 2.11
USP42-202ENST00000404008 AKAP13Q12802 2813 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 PLIN3O60664 434 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 ARL4DP49703 201 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 FCRL6Q6DN72 434 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 FIGLAQ6QHK4 219 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 C17orf64Q86WR6 236 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 PTGR2Q8N8N7 351 aaPredicted RBP28.22■■■□□ 2.11
USP42-202ENST00000404008 WDR36Q8NI36 951 aaKnown RBP28.22■■■□□ 2.11
USP42-202ENST00000404008 TCTN2Q96GX1 697 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 DPH7Q9BTV6 452 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 SCNM1Q9BWG6 230 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 CHRNA10Q9GZZ6 450 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 IQCGQ9H095 443 aaKnown RBP28.22■■■□□ 2.11
USP42-202ENST00000404008 CUEDC1Q9NWM3 386 aaPredicted RBP28.22■■■□□ 2.11
USP42-202ENST00000404008 ZNF446Q9NWS9 450 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 OCIAD1Q9NX40 245 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 SIDT1Q9NXL6 827 aaKnown RBP28.22■■■□□ 2.11
USP42-202ENST00000404008 PLLPQ9Y342 182 aa28.22■■■□□ 2.11
USP42-202ENST00000404008 TYROBPO43914 113 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 SPINK2P20155 84 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 TAC1P20366 129 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 CAMK2BQ13554 666 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 KCNAB1Q14722 419 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 NAA25Q14CX7 972 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 LRRC70Q7Z2Q7 622 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 BMPERQ8N8U9 685 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 PHF21BQ96EK2 531 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 PDE7BQ9NP56 450 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 SSU72Q9NP77 194 aaKnown RBP28.21■■■□□ 2.11
USP42-202ENST00000404008 DNAJC11Q9NVH1 559 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 ANKMY1Q9P2S6 941 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 SATB2Q9UPW6 733 aa28.21■■■□□ 2.11
USP42-202ENST00000404008 KNTC1P50748 2209 aa28.2■■■□□ 2.11
USP42-202ENST00000404008 PMS2P1A4D2B8 440 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 EFCAB7A8K855 629 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 A8MT66 165 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 STX16-NPEPL1H3BU86 382 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 STX16O14662 325 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 MAP3K7O43318 606 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 SASH3O75995 380 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 EBLN1P0CF75 366 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 HGFP14210 728 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 MLLT3P42568 568 aaPredicted RBP28.2■■■□□ 2.1
USP42-202ENST00000404008 SH3BP2P78314 561 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 NFKB2Q00653 900 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 C3orf38Q5JPI3 329 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 ZNF425Q6IV72 752 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 FAM129CQ86XR2 697 aa28.2■■■□□ 2.1
USP42-202ENST00000404008 NEIL2Q969S2 332 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms