RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 GAGE6Q13070 117 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 RBBP5Q15291 538 aaKnown RBP3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 IQCCQ4KMZ1 466 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 SLC10A5Q5PT55 438 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 FAM46CQ5VWP2 391 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 CASC4Q6P4E1 433 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 NHLRC1Q6VVB1 395 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 GDPD4Q6W3E5 623 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 SLC26A9Q7LBE3 791 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 ISCA2Q86U28 154 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 EXOC3L1Q86VI1 746 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 NUDT13Q86X67 352 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 METTL27Q8N6F8 245 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 MGARPQ8TDB4 240 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 SCRN2Q96FV2 425 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 NDNQ99608 321 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 OR2B2Q9GZK3 357 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 TMEM206Q9H813 350 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 ABCB8Q9NUT2 735 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 ACAD8Q9UKU7 415 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 CDH7Q9ULB5 785 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 SNX5Q9Y5X3 404 aa3.55□□□□□ -1.84
HMGB1P17-201ENST00000403495 TRAV24A0A0B4J272 114 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 A0A0U1RQG5 324 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 TRIM64A6NGJ6 449 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 TRIM64BA6NI03 449 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 ZNF263O14978 683 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 FLRT2O43155 660 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 STX6O43752 255 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 LMX1BO60663 402 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 PRKRAO75569 313 aaKnown RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 LUC7L3O95232 432 aaKnown RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 F7P08709 466 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 HMOX1P09601 288 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 DLATP10515 647 aaKnown RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 VDRP11473 427 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 MYL6BP14649 208 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 LIFP15018 202 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 ITIH1P19827 911 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 EFNA1P20827 205 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 LHCGRP22888 699 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 SSTR1P30872 391 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 CEACAM8P31997 349 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 NME5P56597 212 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 PHKG1Q16816 387 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 ZNF672Q499Z4 452 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 ZC2HC1CQ53FD0 456 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 OR4A47Q6IF82 309 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 KIAA1161Q6NSJ0 714 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 TMEM270Q6UE05 265 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 RBMS3Q6XE24 437 aaKnown RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 C15orf39Q6ZRI6 1047 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 LINC00696Q6ZRV3 163 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 ANKRD33Q7Z3H0 272 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 CREBRFQ8IUR6 639 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 AQP12AQ8IXF9 295 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 RYBPQ8N488 228 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 STPG4Q8N801 248 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 LRTM2Q8N967 370 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 KIAA0895Q8NCT3 520 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 KLHDC9Q8NEP7 349 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 OR4C3Q8NH37 302 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 OR52N5Q8NH56 324 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 LRRC8CQ8TDW0 803 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 KRT35Q92764 455 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 SGF29Q96ES7 293 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 LSG1Q9H089 658 aaKnown RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 ZMYND12Q9H0C1 365 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 RIMS4Q9H426 269 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 ZNF556Q9HAH1 456 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 TUFT1Q9NNX1 390 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 ECHDC1Q9NTX5 307 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 SPHK1Q9NYA1 384 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 TRIM17Q9Y577 477 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 R4GN57 208 aa3.54□□□□□ -1.84
HMGB1P17-201ENST00000403495 ACEP12821 1306 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 OOEPA6NGQ2 149 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 C2orf81A6NN90 581 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 C17orf105B2RV13 164 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 F8VVB4 439 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 F8VWA3 439 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 H0YIG0 161 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 P2RY10O00398 339 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 SLC30A4O14863 429 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 ATP6V0E1O15342 81 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 IGHV4-31P0DP07 118 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 IGHV4-38-2P0DP08 117 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 EEF2P13639 858 aaKnown RBP3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 CSTF2P33240 577 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 DUTP33316 252 aaKnown RBP3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 SERPINB6P35237 376 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 SOAT1P35610 550 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 NR2C2P49116 596 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 DLX5P56178 289 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 GPR17Q13304 367 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 CDO1Q16878 200 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 SMU1Q2TAY7 513 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 FAM174BQ3ZCQ3 159 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 GPR33Q49SQ1 333 aa3.53□□□□□ -1.84
HMGB1P17-201ENST00000403495 SLC39A12Q504Y0 691 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms