RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ZNF766Q5HY98 468 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 RNFT1Q5M7Z0 435 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ANKRD20A2Q5SQ80 823 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ANKRD20A1Q5TYW2 823 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ANKRD20A3Q5VUR7 823 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 KCTD11Q693B1 232 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FBXO42Q6P3S6 717 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TMEM205Q6UW68 189 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 DOLPP1Q86YN1 238 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CCDC50Q8IVM0 306 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SLC22A15Q8IZD6 547 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MARVELD2Q8N4S9 558 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TTC29Q8NA56 475 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MDS2Q8NDY4 140 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 OR2L8Q8NGY9 312 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 DENND1AQ8TEH3 1009 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 THAP3Q8WTV1 239 aaPredicted RBP11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CHTF18Q8WVB6 975 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 P3H4Q92791 437 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 C19orf43Q9BQ61 176 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TBL1YQ9BQ87 522 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TRIM51Q9BSJ1 452 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 HEMGNQ9BXL5 484 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZNF700Q9H0M5 742 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 DDX56Q9NY93 547 aaKnown RBP11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 IL1RAPL1Q9NZN1 696 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TNFRSF10DQ9UBN6 386 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 LCMT1Q9UIC8 334 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 PCDHGB6Q9Y5F9 930 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 KLK4Q9Y5K2 254 aa11.29□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SCN3AQ9NY46 2000 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CCDC162PA2VCL2 907 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ASPDHA6ND91 283 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 OR2W5A6NFC9 320 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NPIPA5E9PKD4 350 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FAM227AF5H4B4 570 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FOXS1O43638 330 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 GPC4O75487 556 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 WFS1O76024 890 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 S1PR4O95977 384 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SERPINC1P01008 464 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CD99P14209 185 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CD1EP15812 388 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FBLP22087 321 aaKnown RBP11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FDXRP22570 491 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 OCA2Q04671 838 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 RBPJQ06330 500 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZNF33BQ06732 778 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 TFF3Q07654 80 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SEMA3AQ14563 771 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SF1Q15637 639 aaKnown RBP11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FAM214AQ32MH5 1076 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZC3H12BQ5HYM0 836 aaKnown RBP11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZNF449Q6P9G9 518 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 PACS1Q6VY07 963 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 RIPOR1Q6ZS17 1223 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 BBS12Q6ZW61 710 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 RNF44Q7L0R7 432 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ZC3H7AQ8IWR0 971 aaKnown RBP11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 BEST3Q8N1M1 668 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CFAP61Q8NHU2 1237 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 AGAP11Q8TF27 550 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 KRT35Q92764 455 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CHP1Q99653 195 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 MIPEPQ99797 713 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 KLHL1Q9NR64 748 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ANKRD10Q9NXR5 420 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 STMN3Q9NZ72 180 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 NPIPA1Q9UND3 350 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 LUC7L2Q9Y383 392 aaKnown RBP11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 ASB1Q9Y576 335 aa11.28□□□□□ -0.6
SPTLC1P3-201ENST00000403408 FBN1P35555 2871 aaKnown RBP11.27□□□□□ -0.6
SPTLC1P3-201ENST00000403408 SMTNL1A8MU46 457 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TARM1B6A8C7 271 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 H0YGG7 62 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 H7C0C1 242 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RASGRF2O14827 1237 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SRPX2O60687 465 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SLCO2B1O94956 709 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 EIF2S1P05198 315 aaKnown RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DNAJA1P31689 397 aaKnown RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SLC26A3P40879 764 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ATP5OP48047 213 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 NR0B1P51843 470 aaKnown RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 IST1P53990 364 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ARF3P61204 181 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MAT1AQ00266 395 aaKnown RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TUBA3CQ13748 450 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DSG2Q14126 1118 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FASTKQ14296 549 aaKnown RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ITIH4Q14624 930 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 POU6F1Q14863 301 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 HKDC1Q2TB90 917 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DNAJC21Q5F1R6 531 aaKnown RBP11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SPINK14Q6IE38 97 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 H3F3CQ6NXT2 135 aa11.27□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PRMT9Q6P2P2 845 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms