RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 HOXB9P17482 250 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-203ENST00000401617 AQP4P55087 323 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 INPP5AQ14642 412 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 MAPKAPK3Q16644 382 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 C10orf62Q5T681 223 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-203ENST00000401617 ATG9BQ674R7 924 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 MSANTD1Q6ZTZ1 278 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 CACUL1Q86Y37 369 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 MSRB3Q8IXL7 192 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 RNF175Q8N4F7 328 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 OR7G3Q8NG95 312 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 PPM1MQ96MI6 270 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 SGK2Q9HBY8 427 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 FBXL12Q9NXK8 326 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 VAPAQ9P0L0 249 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 EGFL7Q9UHF1 273 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 CNOT11Q9UKZ1 510 aaKnown RBP11.86□□□□□ -0.51
CLIP4-203ENST00000401617 PRKAB1Q9Y478 270 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 DTNAQ9Y4J8 743 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 PCDHB3Q9Y5E6 796 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 NUP214P35658 2090 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-203ENST00000401617 TCRBV5S2A0A599 114 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 KMOO15229 486 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 DFNA5O60443 496 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 DMPKQ09013 629 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 BLMHQ13867 455 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 SELPLGQ14242 412 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 PLA2G4EQ3MJ16 856 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 LRIF1Q5T3J3 769 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 KIAA1161Q6NSJ0 714 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 DOK6Q6PKX4 331 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 SYTL1Q8IYJ3 562 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 SPDYE1Q8NFV5 336 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-203ENST00000401617 CLHC1Q8NHS4 586 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 CANT1Q8WVQ1 401 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 APOLD1Q96LR9 279 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 OR52E6Q96RD3 313 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 EFHD1Q9BUP0 239 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 ZNF576Q9H609 170 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 SERHLQ9NQF3 203 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 BATF3Q9NR55 127 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 PPT2Q9UMR5 302 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 RUVBL1Q9Y265 456 aaKnown RBP11.86□□□□□ -0.51
CLIP4-203ENST00000401617 TSC22D4Q9Y3Q8 395 aa11.86□□□□□ -0.51
CLIP4-203ENST00000401617 ZNF839A8K0R7 811 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 PAK4O96013 591 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 EGFP01133 1207 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 C1GALT1C1LP0DN25 315 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 KELP23276 732 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 MTAPQ13126 283 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 STARD3Q14849 445 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 GRAMD1BQ3KR37 738 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 RUNDC3AQ59EK9 446 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 SDE2Q6IQ49 451 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 RALGPS2Q86X27 583 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 PROSER1Q86XN7 944 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 SPPL2CQ8IUH8 684 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 DCUN1D3Q8IWE4 304 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 LAS2Q8IYD9 372 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 ADGRG5Q8IZF4 528 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 PAPD5Q8NDF8 572 aaKnown RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 TFGQ92734 400 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 GATA6Q92908 595 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 RAD51AP1Q96B01 352 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 ZNF583Q96ND8 569 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 TSSK3Q96PN8 268 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 NR1H4Q96RI1 486 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 MTERF1Q99551 399 aaKnown RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 EFCAB11Q9BUY7 163 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 PAIP1Q9H074 479 aaKnown RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 KCNH6Q9H252 994 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 WDR26Q9H7D7 661 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 SIRT5Q9NXA8 310 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 SLC25A37Q9NYZ2 338 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 SCML1Q9UN30 329 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 SH2B3Q9UQQ2 575 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 AP3M1Q9Y2T2 418 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 A0A096LPI6 279 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 DHRS12A0PJE2 317 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 PRR19A6NJB7 356 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 MAGEB17A8MXT2 336 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 FOXE1O00358 373 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 PI15O43692 258 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 ERN1O75460 977 aaKnown RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 ETHE1O95571 254 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 FUCA1P04066 466 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 GPIP06744 558 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 UQCRBP14927 111 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 COL9A1P20849 921 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 PRPS1L1P21108 318 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 HRH2P25021 359 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 PTPN6P29350 595 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 S100A3P33764 101 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 OR4D2P58180 307 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 KLC1Q07866 573 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 ARHGAP19Q14CB8 494 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 AASDHQ4L235 1098 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-203ENST00000401617 HMBOX1Q6NT76 420 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 MED27Q6P2C8 311 aa11.85□□□□□ -0.51
CLIP4-203ENST00000401617 OR5AR1Q8NGP9 310 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms