RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 ICAM1P05362 532 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 SRPRAP08240 638 aaKnown RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 ZNF806P0C7X5 589 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 ACADMP11310 421 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 CSRP1P21291 193 aaKnown RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 TCEA1P23193 301 aaKnown RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 BDNFP23560 247 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 DMP1Q13316 513 aaPredicted RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 SIM2Q14190 667 aaPredicted RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 CRYMQ14894 314 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 LPAL2Q16609 132 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 PCGF3Q3KNV8 242 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 RABL6Q3YEC7 729 aaPredicted RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 CCNYL2Q5T2Q4 361 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 LRIF1Q5T3J3 769 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 BEND3Q5T5X7 828 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 NSUN5P2Q63ZY6 315 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 DCLRE1AQ6PJP8 1040 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 GSG1LQ6UXU4 331 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 IKBIPQ70UQ0 350 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 G2E3Q7L622 706 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 TICAM1Q8IUC6 712 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 FBXO16Q8IX29 292 aaPredicted RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 RDM1Q8NG50 284 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 OR6J1Q8NGC5 347 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 OR8K5Q8NH50 307 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 ELMOD3Q96FG2 381 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 TRMT61BQ9BVS5 477 aaKnown RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 PRMT8Q9NR22 394 aaPredicted RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 TCP11L1Q9NUJ3 509 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 HCFC1R1Q9NWW0 138 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 AATFQ9NY61 560 aaKnown RBP eCLIP3.34□□□□□ -1.87
RPA3-203ENST00000401447 MDFICQ9P1T7 246 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 FBXO2Q9UK22 296 aaPredicted RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 CORO1CQ9ULV4 474 aaPredicted RBP3.34□□□□□ -1.87
RPA3-203ENST00000401447 TCF19Q9Y242 345 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 SESN1Q9Y6P5 492 aa3.34□□□□□ -1.87
RPA3-203ENST00000401447 FLNCQ14315 2725 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 SHROOM3Q8TF72 1996 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 IGLV5-45A0A087WSX0 123 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 PGPEP1LA6NFU8 196 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 C15orf62A8K5M9 175 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 MYO1GB0I1T2 1018 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 F5H0A9 414 aaPredicted RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 H0Y626 953 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 MPHOSPH10O00566 681 aaKnown RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 SYNGR3O43761 229 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 HS6ST1O60243 411 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 ZBED4O75132 1171 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 SOCS5O75159 536 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 TRIM16O95361 564 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 IGHV4-39P01824 125 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 ANXA7P20073 488 aaKnown RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 MCCP23508 829 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 RDXP35241 583 aaKnown RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 RPS9P46781 194 aaKnown RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 GPR143P51810 404 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 CTSCP53634 463 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 ARF3P61204 181 aaPredicted RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 ARF1P84077 181 aaKnown RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 CNTN2Q02246 1040 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 CALD1Q05682 793 aaKnown RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 PTPN14Q15678 1187 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 KRTAP21-3Q3LHN1 58 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 ASPRV1Q53RT3 343 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 TMEM179Q6ZVK1 233 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 ATG9AQ7Z3C6 839 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 NME8Q8N427 588 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 SLC5A8Q8N695 610 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 SCFD2Q8WU76 684 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 CLDN23Q96B33 292 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 FBXO17Q96EF6 278 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 SCRN2Q96FV2 425 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 OXNAD1Q96HP4 312 aaPredicted RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 EGLN2Q96KS0 407 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 ZNF354BQ96LW1 612 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 SLF1Q9BQI6 1058 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 RAI14Q9P0K7 980 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 LYVE1Q9Y5Y7 322 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 AHCTF1Q8WYP5 2266 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 CACNA1EQ15878 2313 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 USP9YO00507 2555 aaPredicted RBP3.33□□□□□ -1.88
RPA3-203ENST00000401447 PARP14Q460N5 1801 aa3.33□□□□□ -1.88
RPA3-203ENST00000401447 NAV3Q8IVL0 2385 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 COL12A1Q99715 3063 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 A0A1W2PP11 408 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 A8MZ25 164 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 SMAD9O15198 467 aaKnown RBP3.32□□□□□ -1.88
RPA3-203ENST00000401447 ZBTB43O43298 467 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 TMCC2O75069 709 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 TDGF1P13385 188 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 CASTP20810 708 aaKnown RBP3.32□□□□□ -1.88
RPA3-203ENST00000401447 TNFAIP3P21580 790 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 MSH2P43246 934 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 CAMPP49913 170 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 MVPQ14764 893 aaKnown RBP3.32□□□□□ -1.88
RPA3-203ENST00000401447 SF3A2Q15428 464 aaKnown RBP3.32□□□□□ -1.88
RPA3-203ENST00000401447 ASTE1Q2TB18 679 aaPredicted RBP3.32□□□□□ -1.88
RPA3-203ENST00000401447 KRTAP24-1Q3LI83 254 aa3.32□□□□□ -1.88
RPA3-203ENST00000401447 RARS2Q5T160 578 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms