RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CWF19L1Q69YN2 538 aaKnown RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 DNAAF1Q8NEP3 725 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 ZNF69Q9UC07 566 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 FTSJ1Q9UET6 329 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 ZNF639Q9UID6 485 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 TELO2Q9Y4R8 837 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 SDC3O75056 442 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 CREB1P16220 341 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 NSG1P42857 185 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 NUDT6P53370 316 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 LCN1P1Q5VSP4 162 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 ZNF782Q6ZMW2 699 aaPredicted RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 KCTD3Q9Y597 815 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 MAFBQ9Y5Q3 323 aaPredicted RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 LMTK2Q8IWU2 1503 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 BBIP1A8MTZ0 92 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 NPIPA5E9PKD4 350 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 VIPR1P32241 457 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 PREPP48147 710 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 CCR3P51677 355 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 ELOAQ14241 798 aaKnown RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 CLEC4DQ8WXI8 215 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 BTBD1Q9H0C5 482 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 MKKSQ9NPJ1 570 aaPredicted RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 ZCCHC3Q9NUD5 404 aaKnown RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 PFDN2Q9UHV9 154 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 GNG8Q9UK08 70 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 FZD4Q9ULV1 537 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 PRPF19Q9UMS4 504 aaKnown RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 NPIPA1Q9UND3 350 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 SLC33A1O00400 549 aaPredicted RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 NARSO43776 548 aaKnown RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 FGF18O76093 207 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 VNN2O95498 520 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 HCKP08631 526 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 TPSB2P20231 275 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 ENTPD1P49961 510 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 ECH1Q13011 328 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 TPSAB1Q15661 275 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 PRAMEF17Q5VTA0 474 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 EBF4Q9BQW3 602 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 COQ10BQ9H8M1 238 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 HEBP2Q9Y5Z4 205 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 DNAJA2O60884 412 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 KDM4BO94953 1096 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 C8GP07360 202 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 ENGP17813 658 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 RPS9P46781 194 aaKnown RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 CLCN4P51793 760 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 NDST2P52849 883 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 SRYQ05066 204 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 WRAP73Q9P2S5 460 aaPredicted RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 SALL4Q9UJQ4 1053 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 YIPF1Q9Y548 306 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 C13orf42A0A1B0GVH6 325 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 GATBO75879 557 aaKnown RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 AIF1P55008 147 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 RFTN2Q52LD8 501 aaPredicted RBP13.44□□□□□ -0.26
VAPA-202ENST00000400000 CRB2Q5IJ48 1285 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 PYHIN1Q6K0P9 492 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 UFD1Q92890 307 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 INSL6Q9Y581 213 aa13.44□□□□□ -0.26
VAPA-202ENST00000400000 OTOL1A6NHN0 477 aaPredicted RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 PDLIM1O00151 329 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 HEXBP07686 556 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 RPL5P46777 297 aaKnown RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 XKP51811 444 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 IL10RBQ08334 325 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 IFI44LQ53G44 452 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 PRAMEF14Q5SWL7 426 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 PRAMEF13Q5VWM6 474 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 UBQLNLQ8IYU4 475 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 CLDN19Q8N6F1 224 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 ZBED6CLQ96FA7 236 aaPredicted RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 BHMG1C9JSJ3 638 aaPredicted RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 PEX12O00623 359 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 TSPAN4O14817 238 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 TYRP14679 529 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 LIMK2P53671 638 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 TAS2R39P59534 338 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 RPL6Q02878 288 aaKnown RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 SNX29P2Q8IUI4 249 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 PCDH19Q8TAB3 1148 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 SDCBP2Q9H190 292 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 C1orf109Q9NX04 203 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 GRHL1Q9NZI5 618 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 CORO1CQ9ULV4 474 aaPredicted RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 SORCS3Q9UPU3 1222 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 SPIN1Q9Y657 262 aaPredicted RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 KLF8O95600 359 aaPredicted RBP13.43□□□□□ -0.26
VAPA-202ENST00000400000 ZNF311Q5JNZ3 666 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 HSPBAP1Q96EW2 488 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 SH3BGRL2Q9UJC5 107 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 MROH2AA6NES4 1674 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 MEN1O00255 615 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 VILLO15195 856 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 CHRNB2P17787 502 aa13.43□□□□□ -0.26
VAPA-202ENST00000400000 TTKP33981 857 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms