RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ITGB6P18564 788 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 TAC1P20366 129 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 IL10P22301 178 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 CSTF2P33240 577 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP16-204ENST00000399976 CCT5P48643 541 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 TBPL1P62380 186 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 ZNF844Q08AG5 666 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 TBC1D25Q3MII6 688 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 MROH9Q5TGP6 573 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 CACHD1Q5VU97 1274 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 LIPJQ5W064 366 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 DHRS13Q6UX07 377 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 FAM129CQ86XR2 697 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 ARHGEF39Q8N4T4 335 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 ZNF655Q8N720 491 aaPredicted RBP7.24□□□□□ -1.25
USP16-204ENST00000399976 BANPQ8N9N5 519 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 L3MBTL4Q8NA19 623 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 FKBP10Q96AY3 582 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 ZNF501Q96CX3 271 aaPredicted RBP7.24□□□□□ -1.25
USP16-204ENST00000399976 SLC46A1Q96NT5 459 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 CTRCQ99895 268 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 NUDT22Q9BRQ3 303 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 ABCF3Q9NUQ8 709 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 ARL15Q9NXU5 204 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 PLAAQ9Y263 795 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 LOXL2Q9Y4K0 774 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 A0A1W2PQ72 361 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 DCDC2BA2VCK2 349 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 BLACEA4D250 179 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 K7EPI3 171 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 BIRC5O15392 142 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 SMIM24O75264 130 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 KRT15P19012 456 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 TFEBP19484 476 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 HNF4AP41235 474 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 GRIA3P42263 894 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 GSTM5P46439 218 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 OR4D1Q15615 310 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 TSNQ15631 228 aaKnown RBP7.24□□□□□ -1.25
USP16-204ENST00000399976 PHKG1Q16816 387 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 DUS1LQ6P1R4 473 aaKnown RBP7.24□□□□□ -1.25
USP16-204ENST00000399976 ZYG11AQ6WRX3 759 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 FRA10AC1Q70Z53 315 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 RAB11FIP2Q7L804 512 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 TMPRSS9Q7Z410 1059 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 LAS2Q8IYD9 372 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 MFSD9Q8NBP5 474 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 ZNF483Q8TF39 744 aaPredicted RBP7.24□□□□□ -1.25
USP16-204ENST00000399976 TLCD1Q96CP7 247 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 PTCD3Q96EY7 689 aaKnown RBP7.24□□□□□ -1.25
USP16-204ENST00000399976 TMEM79Q9BSE2 394 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 SLC26A1Q9H2B4 701 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 THSD1Q9NS62 852 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 DNAJC11Q9NVH1 559 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 RNF112Q9ULX5 631 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 KCNE2Q9Y6J6 123 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 CABIN1Q9Y6J0 2220 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 GPR179Q6PRD1 2367 aa7.24□□□□□ -1.25
USP16-204ENST00000399976 NPEPPSL1A6NEC2 478 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 POC1B-GALNT4F8VUJ3 575 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 MAP2K7O14733 419 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CLGNO14967 610 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 SHBGP04278 402 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 HSD3B1P14060 373 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 JUPP14923 745 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 NPPBP16860 134 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ATP5F1P24539 256 aaPredicted RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 HSD3B2P26439 372 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ALDH4A1P30038 563 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 PRTGQ2VWP7 1150 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 TMEM164Q5U3C3 297 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 FCRL6Q6DN72 434 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 HDXQ7Z353 690 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 C17orf64Q86WR6 236 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 FBXO39Q8N4B4 442 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 OR4E2Q8NGC2 313 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ADAMTS18Q8TE60 1221 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 NCSTNQ92542 709 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 REPS1Q96D71 796 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ACBD3Q9H3P7 528 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 MRPS30Q9NP92 439 aaKnown RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 SIRT5Q9NXA8 310 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CACNA1AO00555 2505 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 H0YIV9 168 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CDC7O00311 574 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 TAPBPO15533 448 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ZSCAN9O15535 394 aaPredicted RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 PHGDHO43175 533 aaKnown RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 TYROBPO43914 113 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 STK16O75716 305 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 ZWINTO95229 277 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 PROCP04070 461 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 PIM1P11309 404 aaPredicted RBP7.23□□□□□ -1.25
USP16-204ENST00000399976 GNAZP19086 355 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 PIK3CBP42338 1070 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 CCR8P51685 355 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 UCNP55089 124 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 SKP1P63208 163 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 IFFO1Q0D2I5 559 aa7.23□□□□□ -1.25
USP16-204ENST00000399976 TARDBPQ13148 414 aaKnown RBP eCLIP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms