RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 DNMT3LQ9UJW3 386 aa16.63■□□□□ 0.25
PTPRA-205ENST00000399903 ZNF490Q9ULM2 529 aaPredicted RBP16.63■□□□□ 0.25
PTPRA-205ENST00000399903 A0A0X1KG70 313 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 KERAO60938 352 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 SEC22BO75396 215 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 COL6A1P12109 1028 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 RRM2P31350 389 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 NFKB2Q00653 900 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 MBTPS1Q14703 1052 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 ABRAXAS2Q15018 415 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 PTPRNQ16849 979 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 RALGAPA2Q2PPJ7 1873 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 GPSM1Q86YR5 675 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 MIB1Q86YT6 1006 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 VANGL1Q8TAA9 524 aaPredicted RBP16.62■□□□□ 0.25
PTPRA-205ENST00000399903 PYURFQ96I23 114 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 ACTL8Q9H568 366 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 CATSPERZQ9NTU4 200 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 OSER1Q9NX31 292 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 TAS2R13Q9NYV9 303 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 A0A1W2PQH9 124 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 CCDC182A6NF36 153 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 H3BM21 787 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 H3BQ06 376 aaPredicted RBP16.62■□□□□ 0.25
PTPRA-205ENST00000399903 SLC7A4O43246 635 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 FCHO2Q0JRZ9 810 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 CCDC85BQ15834 202 aaPredicted RBP16.62■□□□□ 0.25
PTPRA-205ENST00000399903 OR2T5Q6IEZ7 315 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 AMIGO1Q86WK6 493 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 OR2T29Q8NH02 315 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 OR52J3Q8NH60 311 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 UCK2Q9BZX2 261 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 TBC1D24Q9ULP9 559 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 SCN10AQ9Y5Y9 1956 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 NIPSNAP2O75323 286 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 UBL4AP11441 157 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 IL7P13232 177 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 TNFSF8P32971 234 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 PTCHD3Q3KNS1 767 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 MARC1Q5VT66 337 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 SLC44A2Q8IWA5 706 aaPredicted RBP16.62■□□□□ 0.25
PTPRA-205ENST00000399903 LIX1Q8N485 282 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 SIMC1Q8NDZ2 872 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 PCNPQ8WW12 178 aaKnown RBP16.62■□□□□ 0.25
PTPRA-205ENST00000399903 SMIM14Q96QK8 99 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 GORASP2Q9H8Y8 452 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 RAD18Q9NS91 495 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 DCAF13Q9NV06 445 aaKnown RBP16.62■□□□□ 0.25
PTPRA-205ENST00000399903 SLC25A37Q9NYZ2 338 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 PCTPQ9UKL6 214 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 MKLN1Q9UL63 735 aa16.62■□□□□ 0.25
PTPRA-205ENST00000399903 A0A0G2JMP0 313 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 IQCF5A8MTL0 148 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 TSPAN9O75954 239 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 SCELO95171 688 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 SSTR4P31391 388 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 HCAR3P49019 387 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 CDKN1CP49918 316 aaPredicted RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 TUSC3Q13454 348 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 IL18R1Q13478 541 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 RAB41Q5JT25 222 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 KIAA1614Q5VZ46 1190 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 CIR1Q86X95 450 aaPredicted RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 GPR151Q8TDV0 419 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 GFM1Q96RP9 751 aaKnown RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 MFSD1Q9H3U5 465 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 TFB2MQ9H5Q4 396 aaKnown RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 FARSBQ9NSD9 589 aaKnown RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 SNTG1Q9NSN8 517 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 OGDHLQ9ULD0 1010 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 SCAMP3O14828 347 aaKnown RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 F9P00740 461 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 PTHP01270 115 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 POU2F1P14859 743 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 SLC19A1P41440 591 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 RAB25P57735 213 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 PRKCDQ05655 676 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 TSTQ16762 297 aaKnown RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 RASSF5Q8WWW0 418 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 FUBP1Q96AE4 644 aaKnown RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 LINGO1Q96FE5 620 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 MKRN2Q9H000 416 aaKnown RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 SYTL2Q9HCH5 934 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 UCKL1Q9NWZ5 548 aa16.61■□□□□ 0.25
PTPRA-205ENST00000399903 RABL2AQ9UBK7 228 aaPredicted RBP16.61■□□□□ 0.25
PTPRA-205ENST00000399903 PCP4L1A6NKN8 68 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 NOS1APO75052 506 aaPredicted RBP16.6■□□□□ 0.25
PTPRA-205ENST00000399903 KRT6AP02538 564 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 KRT6BP04259 564 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 ELP6Q0PNE2 266 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 BAK1Q16611 211 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 BTBD16Q32M84 506 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 DPY19L3Q6ZPD9 716 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 NLRP8Q86W28 1048 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 CCDC71Q8IV32 467 aaPredicted RBP16.6■□□□□ 0.25
PTPRA-205ENST00000399903 KIAA1191Q96A73 305 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 APOL5Q9BWW9 433 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 C12orf4Q9NQ89 552 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 HSPB11Q9Y547 144 aa16.6■□□□□ 0.25
PTPRA-205ENST00000399903 A0A1W2PQ09 198 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms