RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 KLHL33A6NCF5 533 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TRIM64CA6NLI5 447 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 BMP10O95393 424 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PPIBP23284 216 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ALDH3A2P51648 485 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CTSCP53634 463 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ACSM2AQ08AH3 577 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 BIRC2Q13490 618 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 NAE1Q13564 534 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DOC2AQ14183 400 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DUOXA1Q1HG43 343 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FNDC3BQ53EP0 1204 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SPIN4Q56A73 249 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ACSM2BQ68CK6 577 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CAPN13Q6MZZ7 669 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CAMKMTQ7Z624 323 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TRIML2Q8N7C3 387 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 VPS37AQ8NEZ2 397 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 NELL1Q92832 810 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 C11orf24Q96F05 449 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 APIPQ96GX9 242 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 EFCAB11Q9BUY7 163 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CORO2BQ9UQ03 480 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TSC22D4Q9Y3Q8 395 aa17.18■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FAM149AA5PLN7 773 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 RFXANKO14593 260 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PRAMEF4O60810 478 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PGM3O95394 542 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GZMMP51124 257 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 NEK2P51955 445 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 RPA4Q13156 261 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 LAPTM5Q13571 262 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GRIN2CQ14957 1233 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PAGE2BQ5JRK9 111 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PRAMEF9Q5VWM5 478 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ABRAXAS1Q6UWZ7 409 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SATL1Q86VE3 508 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ZDHHC13Q8IUH4 622 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SYT12Q8IV01 421 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ADHFE1Q8IWW8 467 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PNPT1Q8TCS8 783 aaKnown RBP17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SETD7Q8WTS6 366 aaKnown RBP17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FAM162AQ96A26 154 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TBC1D20Q96BZ9 403 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 NUS1Q96E22 293 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 APOLD1Q96LR9 279 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ASB16Q96NS5 453 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 HDAC8Q9BY41 377 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TMEM245Q9H330 911 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 SFXN1Q9H9B4 322 aa17.17■□□□□ 0.34
HLA-DQB1-204ENST00000399084 C1QTNF3-AMACRE9PGA6 284 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FOXE1O00358 373 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 EI24O14681 340 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 NPC1O15118 1278 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CREG1O75629 220 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 CCNDBP1O95273 360 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 C1orf105O95561 183 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PTPN6P29350 595 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TTKP33981 857 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PHC1P78364 1004 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 MLLT1Q03111 559 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GK3PQ14409 553 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ANXA8L1Q5VT79 327 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GALNT18Q6P9A2 607 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TTC33Q6PID6 262 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 UNC5DQ6UXZ4 953 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 USP51Q70EK9 711 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FAM47BQ8NA70 645 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FIG4Q92562 907 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 UBE2E3Q969T4 207 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 AURKBQ96GD4 344 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TSSK3Q96PN8 268 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PHF12Q96QT6 1004 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PKP4Q99569 1192 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PTTG2Q9NZH5 202 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 LIMD1Q9UGP4 676 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PPT2Q9UMR5 302 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FADS3Q9Y5Q0 445 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PDLIM1O00151 329 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ADRB3P13945 408 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GPX2P18283 190 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 IMPA1P29218 277 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 RPL3P39023 403 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GPR1P46091 355 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ALDH3B2P48448 385 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ARSFP54793 590 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DYNC1I2Q13409 638 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 DAG1Q14118 895 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 PGS1Q32NB8 556 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 NADK2Q4G0N4 442 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 ZNF697Q5TEC3 545 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 FAM46CQ5VWP2 391 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 MED27Q6P2C8 311 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 GCNT7Q6ZNI0 430 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 NUDT18Q6ZVK8 323 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 MYLIPQ8WY64 445 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 VPS50Q96JG6 964 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 TRIM4Q9C037 500 aa17.16■□□□□ 0.34
HLA-DQB1-204ENST00000399084 LMAN2LQ9H0V9 348 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms