RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MAGIXQ9H6Y5 334 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 AKTIPQ9H8T0 292 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 TVP23BQ9NYZ1 205 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 NLGN3Q9NZ94 848 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 BHMG1C9JSJ3 638 aaPredicted RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 TFECO14948 347 aaPredicted RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ADAMTS3O15072 1205 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 MID1O15344 667 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 TP73O15350 636 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ADH1BP00325 375 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ENGP17813 658 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 NELFEP18615 380 aaKnown RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 MAP3K8P41279 467 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 GABARAPL2P60520 117 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 TLR1Q15399 786 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 SOWAHAQ2M3V2 549 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 CMPK2Q5EBM0 449 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 FRG2Q64ET8 278 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 CAND1Q86VP6 1230 aaKnown RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 TIGD4Q8IY51 512 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 OR5T3Q8NGG3 340 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 OSTF1Q92882 214 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 FRG2BQ96QU4 278 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ATG10Q9H0Y0 220 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 MTMR10Q9NXD2 777 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF224Q9NZL3 707 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 CD84Q9UIB8 345 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 TBC1D24Q9ULP9 559 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 MRPL42Q9Y6G3 142 aaKnown RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 DISC1C4P0D8 188 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 DCLK1O15075 740 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 PFKMP08237 780 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 F8A1P23610 371 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 DCKP27707 260 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 MASP1P48740 699 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 C1QTNF8P60827 252 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ADAM17P78536 824 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC10A7Q0GE19 358 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 INCA1Q0VD86 236 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 DSG2Q14126 1118 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 KCTD19Q17RG1 926 aaPredicted RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 LRIF1Q5T3J3 769 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 MBLAC2Q68D91 279 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 RNF19BQ6ZMZ0 732 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 LGI4Q8N135 537 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 RASGEF1AQ8N9B8 481 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 AIFM2Q9BRQ8 373 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ABCB9Q9NP78 766 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 CNOT11Q9UKZ1 510 aaKnown RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 TEX264Q9Y6I9 313 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 COL2A1P02458 1487 aaPredicted RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 A0A1B0GVC2 190 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 HLA-DPB1P04440 258 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 PVALBP20472 110 aaPredicted RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 FOXN2P32314 431 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 CSTF2P33240 577 aaKnown RBP eCLIP8.16□□□□□ -1.13e-7■□□□□ 8.8
SPTLC3-201ENST00000399002 FLT3LGP49771 235 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 TMBIM6P55061 237 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC25A25Q6KCM7 469 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 LRRTM4Q86VH4 590 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 INO80EQ8NBZ0 244 aaPredicted RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 OR52J3Q8NH60 311 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 KIAA1191Q96A73 305 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 BCL7BQ9BQE9 202 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 WDR26Q9H7D7 661 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 TNFRSF10DQ9UBN6 386 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 HSPE1-MOB4S4R3N1 261 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 PEAK1Q9H792 1746 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 A0A1W2PP18 115 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 A0A1W2PQ45 241 aaPredicted RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 A0A1W2PQY0 241 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 HAS3O00219 553 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ABCB7O75027 752 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 OAS1P00973 400 aaKnown RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 HSD3B1P14060 373 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 HSD3B2P26439 372 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 POU4F2Q12837 409 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ATP6AP1Q15904 470 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ZNF181Q2M3W8 571 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ACSBG2Q5FVE4 666 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 SH3PXD2AQ5TCZ1 1133 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 DCAF12L1Q5VU92 463 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 CNKSR3Q6P9H4 555 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 SYCE2Q6PIF2 218 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 VITQ6UXI7 678 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 THOC6Q86W42 341 aaKnown RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 ZFAND2BQ8WV99 257 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 HDAC2Q92769 488 aaKnown RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 SLC38A3Q99624 504 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 POLR2J2Q9GZM3 115 aaKnown RBP8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 BTBD1Q9H0C5 482 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 COL20A1Q9P218 1284 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 IFT52Q9Y366 437 aa8.16□□□□□ -1.1
SPTLC3-201ENST00000399002 LCHNA4D1U4 455 aa8.15□□□□□ -1.1
SPTLC3-201ENST00000399002 FAM149AA5PLN7 773 aa8.15□□□□□ -1.1
SPTLC3-201ENST00000399002 CLIC1O00299 241 aa8.15□□□□□ -1.1
SPTLC3-201ENST00000399002 DFNA5O60443 496 aa8.15□□□□□ -1.1
SPTLC3-201ENST00000399002 TMEM63AO94886 807 aa8.15□□□□□ -1.1
SPTLC3-201ENST00000399002 KAT7O95251 611 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms