RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 PPFIBP2Q8ND30 876 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 LINGO1Q96FE5 620 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 CATSPER2Q96P56 530 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 GBP5Q96PP8 586 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 DPH2Q9BQC3 489 aaPredicted RBP16.02■□□□□ 0.16
APTR-201ENST00000398043 NLNQ9BYT8 704 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 ACTL8Q9H568 366 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 SYNPO2LQ9H987 977 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 IKZF3Q9UKT9 509 aa16.02■□□□□ 0.16
APTR-201ENST00000398043 SPTA1P02549 2419 aa16.02■□□□□ 0.15
APTR-201ENST00000398043 ESYT3A0FGR9 886 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 FITM1A5D6W6 292 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 FAM159BA6NKW6 160 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 KATNA1O75449 491 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 WISP3O95389 354 aaPredicted RBP16.01■□□□□ 0.15
APTR-201ENST00000398043 GSTA2P09210 222 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 ITGAXP20702 1163 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 IL2P60568 153 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 RPS18P62269 152 aaKnown RBP16.01■□□□□ 0.15
APTR-201ENST00000398043 PRDX1Q06830 199 aaKnown RBP16.01■□□□□ 0.15
APTR-201ENST00000398043 ZC3H12BQ5HYM0 836 aaKnown RBP16.01■□□□□ 0.15
APTR-201ENST00000398043 ICE2Q659A1 982 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 C8orf74Q6P047 294 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 CAPN12Q6ZSI9 719 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 PAQR7Q86WK9 346 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 ZNF655Q8N720 491 aaPredicted RBP16.01■□□□□ 0.15
APTR-201ENST00000398043 NOA1Q8NC60 698 aaKnown RBP16.01■□□□□ 0.15
APTR-201ENST00000398043 N4BP2L2Q92802 583 aaPredicted RBP16.01■□□□□ 0.15
APTR-201ENST00000398043 MED8Q96G25 268 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 PLCD4Q9BRC7 762 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 DPH7Q9BTV6 452 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 ACAT2Q9BWD1 397 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 RHOJQ9H4E5 214 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 PARVBQ9HBI1 364 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 LRRC4CQ9HCJ2 640 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 NSMCE4AQ9NXX6 385 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 STOX2Q9P2F5 926 aaPredicted RBP16.01■□□□□ 0.15
APTR-201ENST00000398043 ANKMY1Q9P2S6 941 aa16.01■□□□□ 0.15
APTR-201ENST00000398043 FARSAQ9Y285 508 aaKnown RBP16.01■□□□□ 0.15
APTR-201ENST00000398043 LOC105369274A0A096LPK9 316 aa16■□□□□ 0.15
APTR-201ENST00000398043 LOC102723532A0A0G2JNH3 316 aa16■□□□□ 0.15
APTR-201ENST00000398043 FAM95CA0A1B0GW59 222 aa16■□□□□ 0.15
APTR-201ENST00000398043 ZNF839A8K0R7 811 aa16■□□□□ 0.15
APTR-201ENST00000398043 SYF2O95926 243 aaKnown RBP16■□□□□ 0.15
APTR-201ENST00000398043 ONECUT2O95948 504 aa16■□□□□ 0.15
APTR-201ENST00000398043 FAM87AP0C7U9 286 aa16■□□□□ 0.15
APTR-201ENST00000398043 ZNF37AP17032 561 aaPredicted RBP16■□□□□ 0.15
APTR-201ENST00000398043 CMPK1P30085 196 aa16■□□□□ 0.15
APTR-201ENST00000398043 RPA3P35244 121 aaPredicted RBP16■□□□□ 0.15
APTR-201ENST00000398043 TAS2R39P59534 338 aa16■□□□□ 0.15
APTR-201ENST00000398043 RELAQ04206 551 aa16■□□□□ 0.15
APTR-201ENST00000398043 PDAP1Q13442 181 aaKnown RBP16■□□□□ 0.15
APTR-201ENST00000398043 IL10RAQ13651 578 aa16■□□□□ 0.15
APTR-201ENST00000398043 ERV3-1Q14264 604 aa16■□□□□ 0.15
APTR-201ENST00000398043 FRMPD2BQ6IN97 320 aa16■□□□□ 0.15
APTR-201ENST00000398043 C16orf46Q6P387 395 aa16■□□□□ 0.15
APTR-201ENST00000398043 BORAQ6PGQ7 559 aa16■□□□□ 0.15
APTR-201ENST00000398043 MBOAT1Q6ZNC8 495 aa16■□□□□ 0.15
APTR-201ENST00000398043 C3orf62Q6ZUJ4 267 aa16■□□□□ 0.15
APTR-201ENST00000398043 SYVN1Q86TM6 617 aa16■□□□□ 0.15
APTR-201ENST00000398043 CEP97Q8IW35 865 aa16■□□□□ 0.15
APTR-201ENST00000398043 PALM2Q8IXS6 379 aa16■□□□□ 0.15
APTR-201ENST00000398043 OR4N4Q8N0Y3 316 aa16■□□□□ 0.15
APTR-201ENST00000398043 MYO1HQ8N1T3 1032 aa16■□□□□ 0.15
APTR-201ENST00000398043 ZNF843Q8N446 348 aa16■□□□□ 0.15
APTR-201ENST00000398043 PROKR1Q8TCW9 393 aa16■□□□□ 0.15
APTR-201ENST00000398043 MCOLN3Q8TDD5 553 aa16■□□□□ 0.15
APTR-201ENST00000398043 ADAMTS17Q8TE56 1095 aa16■□□□□ 0.15
APTR-201ENST00000398043 ZNF592Q92610 1267 aa16■□□□□ 0.15
APTR-201ENST00000398043 VPS39Q96JC1 886 aa16■□□□□ 0.15
APTR-201ENST00000398043 CCDC138Q96M89 665 aa16■□□□□ 0.15
APTR-201ENST00000398043 MRPS30Q9NP92 439 aaKnown RBP16■□□□□ 0.15
APTR-201ENST00000398043 SLC22A11Q9NSA0 550 aa16■□□□□ 0.15
APTR-201ENST00000398043 DHCR7Q9UBM7 475 aaKnown RBP16■□□□□ 0.15
APTR-201ENST00000398043 TAC3Q9UHF0 121 aa16■□□□□ 0.15
APTR-201ENST00000398043 DMGDHQ9UI17 866 aaKnown RBP16■□□□□ 0.15
APTR-201ENST00000398043 SRPK3Q9UPE1 567 aa16■□□□□ 0.15
APTR-201ENST00000398043 KIF2AO00139 706 aaPredicted RBP15.99■□□□□ 0.15
APTR-201ENST00000398043 SRPX2O60687 465 aaPredicted RBP15.99■□□□□ 0.15
APTR-201ENST00000398043 MED26O95402 600 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 MAGEA4P43358 317 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 RPS15P62841 145 aaKnown RBP15.99■□□□□ 0.15
APTR-201ENST00000398043 NFKB2Q00653 900 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 COL9A2Q14055 689 aaPredicted RBP15.99■□□□□ 0.15
APTR-201ENST00000398043 NAA25Q14CX7 972 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 UGT8Q16880 541 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 SBSNQ6UWP8 590 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 ENDOVQ8N8Q3 282 aaKnown RBP15.99■□□□□ 0.15
APTR-201ENST00000398043 ANKRD7Q92527 254 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 TCFL5Q9UL49 500 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 MTO1Q9Y2Z2 717 aaKnown RBP15.99■□□□□ 0.15
APTR-201ENST00000398043 KCNMB2Q9Y691 235 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 SCN2AQ99250 2005 aa15.99■□□□□ 0.15
APTR-201ENST00000398043 BSNQ9UPA5 3926 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 A0A0J9YVX5 310 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 CNOT3O75175 753 aaKnown RBP15.98■□□□□ 0.15
APTR-201ENST00000398043 KLF7O75840 302 aaPredicted RBP15.98■□□□□ 0.15
APTR-201ENST00000398043 TBPL1P62380 186 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 ABATP80404 500 aa15.98■□□□□ 0.15
APTR-201ENST00000398043 ILF2Q12905 390 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms