RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SPESP1Q6UW49 350 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 LEMD2Q8NC56 503 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 KCNH6Q9H252 994 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CHD7Q9P2D1 2997 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 KLHL42Q9P2K6 505 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 POLR2IP36954 125 aaKnown RBP17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ETV3P41162 512 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CHIT1Q13231 466 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TMEM215Q68D42 235 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 OR4F3Q6IEY1 312 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 OTOP2Q7RTS6 562 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CYB5D2Q8WUJ1 264 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CPPED1Q9BRF8 314 aaPredicted RBP17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ING2Q9H160 280 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MAFFQ9ULX9 164 aa17.82■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GFYI3L273 518 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ERN1O75460 977 aaKnown RBP17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 RFPL2O75678 378 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SCELO95171 688 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ZBTB11O95625 1053 aaPredicted RBP17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ZNF12P17014 697 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PTPN6P29350 595 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CDKL4Q5MAI5 379 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GPR107Q5VW38 600 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CYP2U1Q7Z449 544 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TMEM179BQ7Z7N9 219 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GALNT13Q8IUC8 556 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SDCCAG3Q96C92 435 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 DCAF13Q9NV06 445 aaKnown RBP17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TYRP14679 529 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 WEE1P30291 646 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PPM1AP35813 382 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PIGAP37287 484 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 HNMTP50135 292 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SF1Q15637 639 aaKnown RBP17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GGTA1PQ4G0N0 100 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 LRIF1Q5T3J3 769 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 FRG2Q64ET8 278 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ZNF551Q7Z340 670 aaPredicted RBP17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GPR149Q86SP6 731 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ADIPOR2Q86V24 386 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GPR180Q86V85 440 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 IQCF2Q8IXL9 164 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MCOLN3Q8TDD5 553 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 FRG2BQ96QU4 278 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 OSBPL10Q9BXB5 764 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 FAM83DQ9H4H8 585 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 DNAJC11Q9NVH1 559 aa17.81■□□□□ 0.44
CHRFAM7A-202ENST00000397827 A0A096LPI6 279 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SGTAO43765 313 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PRPS2P11908 318 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CYP2A7P20853 494 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 GZMMP51124 257 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PFN3P60673 137 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ABRQ12979 859 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TEAD2Q15562 447 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ATG9BQ674R7 924 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CCDC149Q6ZUS6 474 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PLPP6Q8IY26 295 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TCAIMQ8N3R3 496 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TMEM132CQ8N3T6 1108 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 L3MBTL4Q8NA19 623 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SGCDQ92629 289 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CMTM7Q96FZ5 175 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ITCHQ96J02 903 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 EMILIN2Q9BXX0 1053 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 NAA50Q9GZZ1 169 aaKnown RBP17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ADNPQ9H2P0 1102 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 C16orf96A6NNT2 1141 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 RFXANKO14593 260 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CNOT3O75175 753 aaKnown RBP17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 LEFTY1O75610 366 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 IL7RP16871 459 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 AMD1P17707 334 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 NRIP1P48552 1158 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 C21orf59P57076 290 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 POLR2LP62875 67 aaKnown RBP17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 VAC14Q08AM6 782 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 DDX39BQ13838 428 aaKnown RBP17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 DOK6Q6PKX4 331 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CALHM3Q86XJ0 350 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 LILRA3Q8N6C8 439 aaPredicted RBP17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 BORCS5Q969J3 196 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PLEKHA8Q96JA3 519 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 AMBRA1Q9C0C7 1298 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CEP44Q9C0F1 390 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 RMND5AQ9H871 391 aa17.8■□□□□ 0.44
CHRFAM7A-202ENST00000397827 TTC34A8MYJ7 566 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 SH3BGRLO75368 114 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CLTBP09497 229 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 MPC1LP0DKB6 136 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CD22P20273 847 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 RECQLP46063 649 aaPredicted RBP17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 HLCSP50747 726 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ARSIQ5FYB1 569 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 LY6G5CQ5SRR4 150 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 PLEKHS1Q5SXH7 462 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 ZDHHC20Q5W0Z9 365 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 CES5AQ6NT32 575 aa17.79■□□□□ 0.44
CHRFAM7A-202ENST00000397827 NOXRED1Q6NXP6 359 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 282 ms