RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PCDHGA1Q9Y5H4 931 aa22.76■■□□□ 1.23
TSPAN4-203ENST00000397397 NTN3O00634 580 aaPredicted RBP22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 BIRC5O15392 142 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 CCNDBP1O95273 360 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 RPS17P08708 135 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 HOXB3P14651 431 aaPredicted RBP22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 CMPK1P30085 196 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 CDC16Q13042 620 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 SPIDRQ14159 915 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 PDK4Q16654 411 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 CLPPQ16740 277 aaPredicted RBP22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 SLC5A12Q1EHB4 618 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 UNC50Q53HI1 259 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 ICE2Q659A1 982 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 METTL2BQ6P1Q9 378 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 TMEM71Q6P5X7 295 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 C17orf64Q86WR6 236 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 CCNYL1Q8N7R7 359 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 OR2L3Q8NG85 312 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 WDR48Q8TAF3 677 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 PPP4R1Q8TF05 950 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 DPYSL5Q9BPU6 564 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 C1QTNF3Q9BXJ4 246 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 PITPNM3Q9BZ71 974 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 TMEM9Q9P0T7 183 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 PCTPQ9UKL6 214 aa22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 MN1Q10571 1320 aaPredicted RBP22.75■■□□□ 1.23
TSPAN4-203ENST00000397397 E2F3O00716 465 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 SUPT7LO94864 414 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 NEFHP12036 1026 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 CEACAM1P13688 526 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 CHN1P15882 459 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 EPB42P16452 691 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 CDH3P22223 829 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 MPSTP25325 297 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 NOVA1P51513 510 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 NAGLUP54802 743 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 PRDX1Q06830 199 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 GTF2H2Q13888 395 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 GTF2H2CQ6P1K8 395 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 RPS27LQ71UM5 84 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 ERMP1Q7Z2K6 904 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 GOLGA7Q7Z5G4 137 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 MOCOSQ96EN8 888 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 PPM1MQ96MI6 270 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 CD180Q99467 661 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 MRPS30Q9NP92 439 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 SH2B3Q9UQQ2 575 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 KCNE2Q9Y6J6 123 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 A0A0J9YY10 115 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 C9P02748 559 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 PIK3CGP48736 1102 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 YBX1P67809 324 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 ABATP80404 500 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 SIM1P81133 766 aaPredicted RBP22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 CFAP157Q5JU67 520 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 SNAP47Q5SQN1 464 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 KIAA1614Q5VZ46 1190 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 TMPRSS9Q7Z410 1059 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 SLCO6A1Q86UG4 719 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 PPP1R14CQ8TAE6 165 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 ZNF483Q8TF39 744 aaPredicted RBP22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 NSUN5Q96P11 429 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 MAP3K3Q99759 626 aa22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 GATA5Q9BWX5 397 aaPredicted RBP22.74■■□□□ 1.23
TSPAN4-203ENST00000397397 SNRNP200O75643 2136 aaKnown RBP22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 MED19A0JLT2 244 aaPredicted RBP22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 TLCD2A6NGC4 264 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 D6RAR5 112 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 GIPC1O14908 333 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 CLGNO14967 610 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 KIF1CO43896 1103 aaKnown RBP22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 RASSF9O75901 435 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 FKBP9O95302 570 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 CDH1P12830 882 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 LSSP48449 732 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 ATP1A2P50993 1020 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 ZNF574Q6ZN55 896 aaPredicted RBP22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 ARFGAP2Q8N6H7 521 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 OR4D9Q8NGE8 314 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 SLC5A11Q8WWX8 675 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 NEIL2Q969S2 332 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 CAPS2Q9BXY5 557 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 SEMA6CQ9H3T2 930 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 C1GALT1Q9NS00 363 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 GPRC5BQ9NZH0 403 aa22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 APOBEC2Q9Y235 224 aaKnown RBP22.73■■□□□ 1.23
TSPAN4-203ENST00000397397 FTH1P19P0C7X4 201 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 FGF3P11487 239 aaPredicted RBP22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 PVRP15151 417 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 GNAZP19086 355 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 CDH13P55290 713 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 CLCQ05315 142 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 CHI3L2Q15782 390 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 RBBP7Q16576 425 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 CACHD1Q5VU97 1274 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 ZCCHC23Q6ZST2 131 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 KLHL25Q9H0H3 589 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 GSTO2Q9H4Y5 243 aa22.72■■□□□ 1.23
TSPAN4-203ENST00000397397 IPPKQ9H8X2 491 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms