RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 RUVBL2Q9Y230 463 aaKnown RBP14.02□□□□□ -0.16
SEC13-208ENST00000397109 PCM1Q15154 2024 aa14.02□□□□□ -0.17
SEC13-208ENST00000397109 ZNF839A8K0R7 811 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 PRICKLE3O43900 615 aaPredicted RBP14.01□□□□□ -0.17
SEC13-208ENST00000397109 OR2B3O76000 313 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 ACSL3O95573 720 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 PRKAR1AP10644 381 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 SKIV2L2P42285 1042 aaKnown RBP14.01□□□□□ -0.17
SEC13-208ENST00000397109 CCR10P46092 362 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 GABRA4P48169 554 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 GPX6P59796 221 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 NAA25Q14CX7 972 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 CYP2A13Q16696 494 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 LRRC8EQ6NSJ5 796 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 C16orf46Q6P387 395 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 TLDC1Q6P9B6 456 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 ZNF517Q6ZMY9 492 aaPredicted RBP14.01□□□□□ -0.17
SEC13-208ENST00000397109 PALM2Q8IXS6 379 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 DSELQ8IZU8 1212 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 DNAJC22Q8N4W6 341 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 LMNTD1Q8N9Z9 388 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 FBXO15Q8NCQ5 510 aaPredicted RBP14.01□□□□□ -0.17
SEC13-208ENST00000397109 ZUFSPQ96AP4 578 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 CFAP36Q96G28 342 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 GPR21Q99679 349 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 ADNPQ9H2P0 1102 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 PPANQ9NQ55 473 aaKnown RBP14.01□□□□□ -0.17
SEC13-208ENST00000397109 TAS2R13Q9NYV9 303 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 TSR3Q9UJK0 312 aaKnown RBP14.01□□□□□ -0.17
SEC13-208ENST00000397109 FARSAQ9Y285 508 aaKnown RBP14.01□□□□□ -0.17
SEC13-208ENST00000397109 MED16Q9Y2X0 877 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 MRPS18BQ9Y676 258 aaKnown RBP14.01□□□□□ -0.17
SEC13-208ENST00000397109 SPTA1P02549 2419 aa14.01□□□□□ -0.17
SEC13-208ENST00000397109 ARHGEF33A8MVX0 844 aa14□□□□□ -0.17
SEC13-208ENST00000397109 TARM1B6A8C7 271 aa14□□□□□ -0.17
SEC13-208ENST00000397109 MYO1CO00159 1063 aa14□□□□□ -0.17
SEC13-208ENST00000397109 ZNF749O43361 778 aa14□□□□□ -0.17
SEC13-208ENST00000397109 CREG1O75629 220 aa14□□□□□ -0.17
SEC13-208ENST00000397109 C1QAP02745 245 aa14□□□□□ -0.17
SEC13-208ENST00000397109 PRB1P04280 392 aa14□□□□□ -0.17
SEC13-208ENST00000397109 RAB40ALP0C0E4 278 aa14□□□□□ -0.17
SEC13-208ENST00000397109 MAGP20916 626 aa14□□□□□ -0.17
SEC13-208ENST00000397109 PTPN4P29074 926 aa14□□□□□ -0.17
SEC13-208ENST00000397109 SSTR1P30872 391 aa14□□□□□ -0.17
SEC13-208ENST00000397109 RORAP35398 523 aa14□□□□□ -0.17
SEC13-208ENST00000397109 MDH1P40925 334 aaKnown RBP14□□□□□ -0.17
SEC13-208ENST00000397109 RGS4P49798 205 aa14□□□□□ -0.17
SEC13-208ENST00000397109 MAGOHP61326 146 aaKnown RBP14□□□□□ -0.17
SEC13-208ENST00000397109 CCSMST1Q4G0I0 132 aa14□□□□□ -0.17
SEC13-208ENST00000397109 ZC3H12BQ5HYM0 836 aaKnown RBP14□□□□□ -0.17
SEC13-208ENST00000397109 TEDDM1Q5T9Z0 273 aa14□□□□□ -0.17
SEC13-208ENST00000397109 PRAMEF17Q5VTA0 474 aa14□□□□□ -0.17
SEC13-208ENST00000397109 FAM199XQ6PEV8 388 aaPredicted RBP14□□□□□ -0.17
SEC13-208ENST00000397109 TRMT10BQ6PF06 316 aaKnown RBP14□□□□□ -0.17
SEC13-208ENST00000397109 FIGLAQ6QHK4 219 aa14□□□□□ -0.17
SEC13-208ENST00000397109 TAX1BP1Q86VP1 789 aa14□□□□□ -0.17
SEC13-208ENST00000397109 EXD3Q8N9H8 876 aa14□□□□□ -0.17
SEC13-208ENST00000397109 SLC38A9Q8NBW4 561 aa14□□□□□ -0.17
SEC13-208ENST00000397109 GIMAP7Q8NHV1 300 aa14□□□□□ -0.17
SEC13-208ENST00000397109 CD200R1Q8TD46 325 aa14□□□□□ -0.17
SEC13-208ENST00000397109 DENND1AQ8TEH3 1009 aa14□□□□□ -0.17
SEC13-208ENST00000397109 ASB11Q8WXH4 323 aa14□□□□□ -0.17
SEC13-208ENST00000397109 SLC30A3Q99726 388 aa14□□□□□ -0.17
SEC13-208ENST00000397109 AKIRIN1Q9H9L7 192 aaPredicted RBP14□□□□□ -0.17
SEC13-208ENST00000397109 PCMTD2Q9NV79 361 aa14□□□□□ -0.17
SEC13-208ENST00000397109 SENP1Q9P0U3 644 aa14□□□□□ -0.17
SEC13-208ENST00000397109 TRMT6Q9UJA5 497 aaKnown RBP14□□□□□ -0.17
SEC13-208ENST00000397109 CORO1CQ9ULV4 474 aaPredicted RBP14□□□□□ -0.17
SEC13-208ENST00000397109 SRPK3Q9UPE1 567 aa14□□□□□ -0.17
SEC13-208ENST00000397109 FASNP49327 2511 aaKnown RBP14□□□□□ -0.17
SEC13-208ENST00000397109 TCRBV9S1A1TA0A576 114 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 TLDC2A0PJX2 215 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 GFYI3L273 518 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 ZBTB14O43829 449 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 AHSGP02765 367 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 F7P08709 466 aaPredicted RBP13.99□□□□□ -0.17
SEC13-208ENST00000397109 ERGP11308 486 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 AGXTP21549 392 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 C3orf62Q6ZUJ4 267 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 SYVN1Q86TM6 617 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 FAM20CQ8IXL6 584 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 SYTL1Q8IYJ3 562 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 ZNF843Q8N446 348 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 APOBEC4Q8WW27 367 aaKnown RBP13.99□□□□□ -0.17
SEC13-208ENST00000397109 SMPDL3AQ92484 453 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 C17orf62Q9BQA9 187 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 CHST8Q9H2A9 424 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 ACTL8Q9H568 366 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 IRAK4Q9NWZ3 460 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 GEMIN8Q9NWZ8 242 aaKnown RBP13.99□□□□□ -0.17
SEC13-208ENST00000397109 EURLQ9NYK6 297 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 POLHQ9Y253 713 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 KLK4Q9Y5K2 254 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 SMG1Q96Q15 3661 aaKnown RBP13.99□□□□□ -0.17
SEC13-208ENST00000397109 KALRNO60229 2985 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 H3BMH7 237 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 ZSCAN9O15535 394 aaPredicted RBP13.99□□□□□ -0.17
SEC13-208ENST00000397109 C1QL1O75973 258 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 FAM87AP0C7U9 286 aa13.99□□□□□ -0.17
SEC13-208ENST00000397109 GABRB3P28472 473 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms