RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 DIO3P55073 304 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 ACTR1AP61163 376 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 IRF8Q02556 426 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 ZNF423Q2M1K9 1284 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 PRAMEF14Q5SWL7 426 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 PRAMEF13Q5VWM6 474 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 FRG2Q64ET8 278 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 SLC30A9Q6PML9 568 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 C11orf24Q96F05 449 aaPredicted RBP12.28□□□□□ -0.44
TRIM39-204ENST00000396548 HSPA12BQ96MM6 686 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 FRG2BQ96QU4 278 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 SPNS1Q9H2V7 528 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 PFDN4Q9NQP4 134 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 G3BP2Q9UN86 482 aaKnown RBP12.28□□□□□ -0.44
TRIM39-204ENST00000396548 TLR4O00206 839 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 ANKRD28O15084 1053 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 KRT6AP02538 564 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 KRT6BP04259 564 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 ESRRAP11474 423 aaPredicted RBP12.27□□□□□ -0.44
TRIM39-204ENST00000396548 XRCC1P18887 633 aaPredicted RBP12.27□□□□□ -0.44
TRIM39-204ENST00000396548 KRT6CP48668 564 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 NEK2P51955 445 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 UBE2IP63279 158 aaKnown RBP12.27□□□□□ -0.44
TRIM39-204ENST00000396548 GRIK2Q13002 908 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 RFTN2Q52LD8 501 aaPredicted RBP12.27□□□□□ -0.44
TRIM39-204ENST00000396548 LAYNQ6UX15 382 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 POU5F2Q8N7G0 328 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 ABHD11Q8NFV4 315 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 RP9Q8TA86 221 aaKnown RBP12.27□□□□□ -0.44
TRIM39-204ENST00000396548 SMPDL3AQ92484 453 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 CMTM5Q96DZ9 223 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 BTBD10Q9BSF8 475 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 HAUS8Q9BT25 410 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 LRRC61Q9BV99 259 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 AASDHPPTQ9NRN7 309 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 TAAR2Q9P1P5 351 aa12.27□□□□□ -0.44
TRIM39-204ENST00000396548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 IGKV1-8A0A0C4DH67 115 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 ZNF839A8K0R7 811 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 PDZK1P1A8MUH7 402 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 RGS14O43566 566 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 NME1P15531 152 aaKnown RBP12.27□□□□□ -0.45
TRIM39-204ENST00000396548 NXPH1P58417 271 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 KCNJ2P63252 427 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 ZNF542PQ5EBM4 170 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 ADNP2Q6IQ32 1131 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 TMEFF1Q8IYR6 380 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 OR2A1Q8NGT9 310 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 FLVCR1-AS1Q8TAF5 88 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 RAB11FIP5Q9BXF6 653 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 ACTL8Q9H568 366 aa12.27□□□□□ -0.45
TRIM39-204ENST00000396548 RSL1D1O76021 490 aaKnown RBP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 IDO1P14902 403 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 HMGCS1Q01581 520 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 CSTF3Q12996 717 aaKnown RBP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 ATP6AP1LQ52LC2 224 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 PDCD4Q53EL6 469 aaKnown RBP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 ZFAND4Q86XD8 727 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 RNF175Q8N4F7 328 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 C2orf73Q8N5S3 287 aaPredicted RBP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 MTFMTQ96DP5 389 aaKnown RBP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 TEX37Q96LM6 180 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 GSDMCQ9BYG8 508 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 XKR8Q9H6D3 395 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 PELI2Q9HAT8 420 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 BRF2Q9HAW0 419 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 SLC40A1Q9NP59 571 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 TMEM45AQ9NWC5 275 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 COLEC10Q9Y6Z7 277 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 PSMD12O00232 456 aaPredicted RBP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 PSMB5P28074 263 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 NDUFS1P28331 727 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 ARL1P40616 181 aaPredicted RBP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 CPA2P48052 419 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 ILF3Q12906 894 aaKnown RBP eCLIP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 PAOXQ6QHF9 649 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 VN1R5Q7Z5H4 357 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 RBM15BQ8NDT2 890 aaKnown RBP12.26□□□□□ -0.45
TRIM39-204ENST00000396548 OR7G3Q8NG95 312 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 PPP3R2Q96LZ3 170 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 RTKNQ9BST9 563 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 PCBD2Q9H0N5 130 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 DYRK1BQ9Y463 629 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 VGLL3A8MV65 326 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 FBP2O00757 339 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 VILLO15195 856 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 THRAP10827 490 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 ACPPP15309 386 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 FNTBP49356 437 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 TCEA2Q15560 299 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 AP5B1Q2VPB7 878 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 LPCAT2Q7L5N7 544 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 TMPRSS11BQ86T26 416 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 SFTPA2Q8IWL1 248 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 NAGSQ8N159 534 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 KIF2BQ8N4N8 673 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 ZFPM2Q8WW38 1151 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 SELENOMQ8WWX9 145 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 EFCAB11Q9BUY7 163 aa12.26□□□□□ -0.45
TRIM39-204ENST00000396548 TBC1D10AQ9BXI6 508 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms