RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ZNF354BQ96LW1 612 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 SELENOSQ9BQE4 189 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 TP63Q9H3D4 680 aaPredicted RBP12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 ANKRD10Q9NXR5 420 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 UBP1Q9NZI7 540 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 POLG2Q9UHN1 485 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 PLAGL1Q9UM63 463 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 KLK4Q9Y5K2 254 aa12.94□□□□□ -0.34
VCPKMT-201ENST00000395859 A6NNC1 897 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 SRPX2O60687 465 aaPredicted RBP12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 AP2A1O95782 977 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 UQCRHP07919 91 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 MYBL1P10243 752 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 CD46P15529 392 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 ST13P50502 369 aaKnown RBP12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 FASTKQ14296 549 aaKnown RBP12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 PDK2Q15119 407 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 SLC1A5Q15758 541 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 TEX44Q53QW1 395 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 FKBP15Q5T1M5 1219 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 FCRLBQ6BAA4 426 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 PLAG1Q6DJT9 500 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 FRMPD2BQ6IN97 320 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 SLC25A25Q6KCM7 469 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 ZNF571Q7Z3V5 609 aaPredicted RBP12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 ZNF227Q86WZ6 799 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 CPNE8Q86YQ8 564 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 CRLF3Q8IUI8 442 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 MYRIPQ8NFW9 859 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 BLOC1S5Q8TDH9 187 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 TEKT5Q96M29 485 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 ERGIC2Q96RQ1 377 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 UTP23Q9BRU9 249 aaKnown RBP12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 ISCUQ9H1K1 167 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 ZNF395Q9H8N7 513 aaPredicted RBP12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 C14orf105Q9NVL8 296 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 CRIM1Q9NZV1 1036 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 MYO1AQ9UBC5 1043 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 FAM153AQ9UHL3 310 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 FKBPLQ9UIM3 349 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 ASF1AQ9Y294 204 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 ARL5AQ9Y689 179 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 ARID1AO14497 2285 aa12.93□□□□□ -0.34
VCPKMT-201ENST00000395859 MPDZO75970 2070 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 A8MUI8 341 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 GOLGA6L6A8MZA4 724 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 STX7O15400 261 aaKnown RBP12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 NME2P1O60361 137 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 CCDC172P0C7W6 258 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 FBLP22087 321 aaKnown RBP12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 NME2P22392 152 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 CDC25BP30305 580 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 SLC26A3P40879 764 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 VSX2P58304 361 aaPredicted RBP12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 MYL5Q02045 173 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 PMPCAQ10713 525 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 MSLNQ13421 630 aaPredicted RBP12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 GRB7Q14451 532 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 PRTGQ2VWP7 1150 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 SHEQ5VZ18 495 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 ARHGEF39Q8N4T4 335 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 SLC25A41Q8N5S1 370 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 LMNTD1Q8N9Z9 388 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 RNF214Q8ND24 703 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 DCUN1D1Q96GG9 259 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 OXNAD1Q96HP4 312 aaPredicted RBP12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 COPS8Q99627 209 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 FICDQ9BVA6 458 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 PLEKHF2Q9H8W4 249 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 DMRT3Q9NQL9 472 aa12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 STOX2Q9P2F5 926 aaPredicted RBP12.92□□□□□ -0.34
VCPKMT-201ENST00000395859 LOC105369274A0A096LPK9 316 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 A0A0A6YYK5 440 aaPredicted RBP12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 TRBV5-4A0A0C4DH59 114 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 LOC102723532A0A0G2JNH3 316 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 TARM1B6A8C7 271 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 RASGRF2O14827 1237 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 FFAR3O14843 346 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 GPR42O15529 346 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 HEXBP07686 556 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 GSTM1P09488 218 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 RALBP11234 206 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 CDK11BP21127 795 aaKnown RBP12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 PTPN3P26045 913 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 EMP3P54852 163 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 GSTM4Q03013 218 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 AP1B1Q10567 949 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 TAZQ16635 292 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 MEP1AQ16819 746 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 CMPK2Q5EBM0 449 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 ZNF468Q5VIY5 522 aaPredicted RBP12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 E4F1Q66K89 784 aaPredicted RBP12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 SLC9A4Q6AI14 798 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 ACAD11Q709F0 780 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 CXorf67Q86X51 503 aaPredicted RBP12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 LIX1LQ8IVB5 337 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 ZC3H7AQ8IWR0 971 aaKnown RBP12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 OR4N4Q8N0Y3 316 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 KCTD6Q8NC69 237 aa12.91□□□□□ -0.34
VCPKMT-201ENST00000395859 FAM98AQ8NCA5 519 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms