RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 OR10H3O60404 316 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 IGHEP01854 428 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 GIMD1P0DJR0 217 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 H2AFXP16104 143 aaPredicted RBP12.5□□□□□ -0.41
CAST-206ENST00000395812 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
CAST-206ENST00000395812 DEPDC1Q5TB30 811 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 ZBTB49Q6ZSB9 765 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.5□□□□□ -0.41
CAST-206ENST00000395812 ZDHHC13Q8IUH4 622 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 MICU2Q8IYU8 434 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 C11orf65Q8NCR3 313 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 ZDHHC5Q9C0B5 715 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 HHATLQ9HCP6 504 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 KCND1Q9NSA2 647 aa12.5□□□□□ -0.41
CAST-206ENST00000395812 A0A1W2PRB8 838 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 FAM227AF5H4B4 570 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 ACOT7O00154 380 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 PLIN3O60664 434 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 SLC26A3P40879 764 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 NFE2L1Q14494 772 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 OASLQ15646 514 aaKnown RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 OTUD3Q5T2D3 398 aaPredicted RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 FIGLAQ6QHK4 219 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 EIF3MQ7L2H7 374 aaKnown RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 MREGQ8N565 214 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 DTD2Q96FN9 168 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 DEPDC7Q96QD5 511 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 EDEM2Q9BV94 578 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 EPB41L1Q9H4G0 881 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 PRODH2Q9UF12 536 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 FZD4Q9ULV1 537 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 DNMT3AQ9Y6K1 912 aaPredicted RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 USP54Q70EL1 1684 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 ZNF860A6NHJ4 632 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 S1PR4O95977 384 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 AHSGP02765 367 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 MPC1LP0DKB6 136 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 NR2F6P10588 404 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 FOLR3P41439 243 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 RPS15AP62244 130 aaKnown RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 ZNF267Q14586 743 aaPredicted RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 GCNT6Q5T4J0 391 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 C1orf189Q5VU69 101 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 CYP2R1Q6VVX0 501 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 PPP1R3BQ86XI6 285 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 KDM1BQ8NB78 822 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 LYARQ9NX58 379 aaKnown RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 ARMCX1Q9P291 453 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 HS3ST2Q9Y278 367 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 SPIN1Q9Y657 262 aaPredicted RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 SLC16A5O15375 505 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 SAGP10523 405 aaPredicted RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 HMGA1P17096 107 aaKnown RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 MPSTP25325 297 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 CNR2P34972 360 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 NIPAL4Q0D2K0 466 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 TYW3Q6IPR3 259 aaKnown RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 RANBP3LQ86VV4 465 aaPredicted RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 CBARPQ8N350 705 aaPredicted RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 CNDP2Q96KP4 475 aaKnown RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 SLC38A2Q96QD8 506 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 MECRQ9BV79 373 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 CDADC1Q9BWV3 514 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 GATA5Q9BWX5 397 aaPredicted RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 SCDO00767 359 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 IFNGP01579 166 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 KLK1P06870 262 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 KHKP50053 298 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 CLEC6AQ6EIG7 209 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 TMEM139Q8IV31 216 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 GLB1L3Q8NCI6 653 aaPredicted RBP12.49□□□□□ -0.41
CAST-206ENST00000395812 CKAP2Q8WWK9 683 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 CRB3Q9BUF7 120 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 DKK3Q9UBP4 350 aa12.49□□□□□ -0.41
CAST-206ENST00000395812 IL6P05231 212 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 TIMP2P16035 220 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 CSNK1DP48730 415 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 CDK3Q00526 305 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 IRF4Q15306 451 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 TERF2Q15554 542 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 ZNF77Q15935 545 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 DEFB134Q4QY38 66 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 PAQR9Q6ZVX9 377 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 ZC3HC1Q86WB0 502 aaKnown RBP12.48□□□□□ -0.41
CAST-206ENST00000395812 CPSF7Q8N684 471 aaKnown RBP12.48□□□□□ -0.41
CAST-206ENST00000395812 C1orf52Q8N6N3 182 aaKnown RBP12.48□□□□□ -0.41
CAST-206ENST00000395812 SMYD1Q8NB12 490 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 DUSP26Q9BV47 211 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 SLC29A3Q9BZD2 475 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 ACSS2Q9NR19 701 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 OAS3Q9Y6K5 1087 aaKnown RBP12.48□□□□□ -0.41
CAST-206ENST00000395812 RIF1Q5UIP0 2472 aaKnown RBP12.48□□□□□ -0.41
CAST-206ENST00000395812 FAM234BA2RU67 622 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 TMCC2O75069 709 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 HERC3Q15034 1050 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 MANEAQ5SRI9 462 aa12.48□□□□□ -0.41
CAST-206ENST00000395812 RSPO2Q6UXX9 243 aaPredicted RBP12.48□□□□□ -0.41
CAST-206ENST00000395812 CCDC81Q6ZN84 652 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms