RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 UQCRHP07919 91 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 COX6A1P12074 109 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 FBLP22087 321 aaKnown RBP20.13■□□□□ 0.81
TRAF4-203ENST00000394925 SOX11P35716 441 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 PPARGP37231 505 aaPredicted RBP20.13■□□□□ 0.81
TRAF4-203ENST00000394925 BDKRB1P46663 353 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 PRAMEP78395 509 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 EEF1A2Q05639 463 aaKnown RBP20.13■□□□□ 0.81
TRAF4-203ENST00000394925 CCSMST1Q4G0I0 132 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 PPP1R21Q6ZMI0 780 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 OR2L3Q8NG85 312 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 GSDMBQ8TAX9 411 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 SKA2Q8WVK7 121 aaPredicted RBP20.13■□□□□ 0.81
TRAF4-203ENST00000394925 HAS2Q92819 552 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 RAD51AP1Q96B01 352 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 YIPF2Q9BWQ6 316 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.13■□□□□ 0.818e-8■■■□□ 17.6
TRAF4-203ENST00000394925 SUCOQ9UBS9 1254 aaKnown RBP20.13■□□□□ 0.81
TRAF4-203ENST00000394925 TTC7AQ9ULT0 858 aaPredicted RBP20.13■□□□□ 0.81
TRAF4-203ENST00000394925 KLF2Q9Y5W3 355 aaPredicted RBP20.13■□□□□ 0.81
TRAF4-203ENST00000394925 NFS1Q9Y697 457 aa20.13■□□□□ 0.81
TRAF4-203ENST00000394925 FFAR3O14843 346 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 GPR42O15529 346 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 SERPINA7P05543 415 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 ERVK-10P10266 1014 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 CXCR2P25025 360 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 ADRA1DP25100 572 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 GRIA1P42261 906 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 EMP2P54851 167 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 SRSF11Q05519 484 aaKnown RBP20.12■□□□□ 0.81
TRAF4-203ENST00000394925 INAQ16352 499 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 MUM1Q2TAK8 710 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 FAAH2Q6GMR7 532 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 PTRHD1Q6GMV3 140 aaKnown RBP20.12■□□□□ 0.81
TRAF4-203ENST00000394925 CNSTQ6PJW8 725 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 TMEM207Q6UWW9 146 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 RAB42Q8N4Z0 105 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 SLC35B2Q8TB61 432 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 C10orf90Q96M02 699 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 ETNK1Q9HBU6 452 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 ANAPC5Q9UJX4 755 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 RIMKLBQ9ULI2 386 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 RUVBL2Q9Y230 463 aaKnown RBP20.12■□□□□ 0.81
TRAF4-203ENST00000394925 KLK4Q9Y5K2 254 aa20.12■□□□□ 0.81
TRAF4-203ENST00000394925 IGLV3-12A0A075B6K2 115 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 GRID2IPA4D2P6 1211 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 IDSB3KWA1 339 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 CCL21O00585 134 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 PRMT5O14744 637 aaPredicted RBP20.11■□□□□ 0.81
TRAF4-203ENST00000394925 WFS1O76024 890 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 UNC5CO95185 931 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 C1orf105O95561 183 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 CELA2AP08217 269 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 SNRPB2P08579 225 aaKnown RBP20.11■□□□□ 0.81
TRAF4-203ENST00000394925 FDXRP22570 491 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 YBX1P67809 324 aaKnown RBP20.11■□□□□ 0.81
TRAF4-203ENST00000394925 ACVR1Q04771 509 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 KLF1Q13351 362 aaPredicted RBP20.11■□□□□ 0.81
TRAF4-203ENST00000394925 ZXDCQ2QGD7 858 aaPredicted RBP20.11■□□□□ 0.81
TRAF4-203ENST00000394925 RNF44Q7L0R7 432 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 MRGPRGQ86SM5 289 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 LRRC57Q8N9N7 239 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 OR2A1Q8NGT9 310 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 CCDC120Q96HB5 630 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 CABS1Q96KC9 395 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 TRPC4Q9UBN4 977 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 MRPS2Q9Y399 296 aaKnown RBP20.11■□□□□ 0.81
TRAF4-203ENST00000394925 EPN1Q9Y6I3 576 aaPredicted RBP20.11■□□□□ 0.81
TRAF4-203ENST00000394925 AKAP9Q99996 3911 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 CCDC168Q8NDH2 2452 aa20.11■□□□□ 0.81
TRAF4-203ENST00000394925 IGHV1-45A0A0A0MS14 117 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 TCRBV7S2A1N4TA0A589 114 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 SOWAHDA6NJG2 315 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 ERI2A8K979 691 aaKnown RBP20.1■□□□□ 0.81
TRAF4-203ENST00000394925 BMP10O95393 424 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 MST1P26927 711 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 AARS2Q5JTZ9 985 aaKnown RBP20.1■□□□□ 0.81
TRAF4-203ENST00000394925 FBXO42Q6P3S6 717 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 GDF7Q7Z4P5 450 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 HMGCLL1Q8TB92 370 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 ACAT2Q9BWD1 397 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 LACRTQ9GZZ8 138 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 TSPY26PQ9H489 355 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 CATSPERZQ9NTU4 200 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 MARCH4Q9P2E8 410 aaPredicted RBP20.1■□□□□ 0.81
TRAF4-203ENST00000394925 SH3BGRL2Q9UJC5 107 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 AMFRQ9UKV5 643 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 PACSIN2Q9UNF0 486 aaPredicted RBP20.1■□□□□ 0.81
TRAF4-203ENST00000394925 TCAF1Q9Y4C2 921 aa20.1■□□□□ 0.81
TRAF4-203ENST00000394925 CPAMD8Q8IZJ3 1885 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 A0A1W2PPV9 198 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 E7EVH7 732 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 H0YGG7 62 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 SUN1O94901 812 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 RASAL1O95294 804 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 WDPCPO95876 746 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 HEXBP07686 556 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 HTR1EP28566 365 aa20.09■□□□□ 0.81
TRAF4-203ENST00000394925 ARF3P61204 181 aaPredicted RBP20.09■□□□□ 0.81
TRAF4-203ENST00000394925 FASTKQ14296 549 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms