RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 A0A1B0GX78 115 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 MAGEB16A2A368 324 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 VSTM2BA6NLU5 285 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 TARM1B6A8C7 271 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 C9J4A7 227 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 F8W8V4 182 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 H3BMM5 538 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 CES2O00748 559 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 SOCS6O14544 535 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 DNALI1O14645 258 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 DSCR3O14972 297 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 KPNA5O15131 536 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 P2RX6O15547 441 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 NRDCO43847 1150 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 TSPAN12O95859 305 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 DDAH2O95865 285 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 AHSGP02765 367 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 RPN2P04844 631 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 AGXTP21549 392 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 ALAS2P22557 587 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 GNLYP22749 145 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 CCNFP41002 786 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 SKIV2L2P42285 1042 aaKnown RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 PGDP52209 483 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 CDKN2DP55273 166 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 DHX9Q08211 1270 aaKnown RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 Q0VFX4 171 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 PTK6Q13882 451 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 SSPNQ14714 243 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 CRYMQ14894 314 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 NKG7Q16617 165 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 CRB2Q5IJ48 1285 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 DCAF10Q5QP82 559 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 RNF187Q5TA31 235 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 ARMC3Q5W041 872 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 TRMT10BQ6PF06 316 aaKnown RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 KIRREL2Q6UWL6 708 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 MBOAT1Q6ZNC8 495 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 OVCH1Q7RTY7 1134 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 LAPTM4BQ86VI4 370 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 PLD3Q8IV08 490 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 PPIL6Q8IXY8 311 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 CPNE9Q8IYJ1 553 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 FBXO15Q8NCQ5 510 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 C2CD4AQ8NCU7 369 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 SKA2Q8WVK7 121 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 KCNJ9Q92806 393 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 SLCO2A1Q92959 643 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 ZUFSPQ96AP4 578 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 SLC22A18Q96BI1 424 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 OR2A5Q96R48 311 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 NDNQ99608 321 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 SELENOSQ9BQE4 189 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 PLCD4Q9BRC7 762 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 AARSD1Q9BTE6 412 aaKnown RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 DPH7Q9BTV6 452 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 NDC1Q9BTX1 674 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 MFRPQ9BY79 579 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 ZNF552Q9H707 407 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 ACSS2Q9NR19 701 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 IARS2Q9NSE4 1012 aaKnown RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 P4HTMQ9NXG6 502 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 SPATA7Q9P0W8 599 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 KLHL42Q9P2K6 505 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 PCYOX1Q9UHG3 505 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 IKZF3Q9UKT9 509 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 SRPK3Q9UPE1 567 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 MRPS2Q9Y399 296 aaKnown RBP8.46□□□□□ -1.06
ATG4A-205ENST00000394892 CSAG2Q9Y5P2 127 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 HS3ST3B1Q9Y662 390 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 MAD1L1Q9Y6D9 718 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 MAU2Q9Y6X3 613 aa8.46□□□□□ -1.06
ATG4A-205ENST00000394892 NBPF19A0A087WUL8 3843 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 CTAGE9A4FU28 777 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 H0YGG7 62 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 FFAR3O14843 346 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 GPR42O15529 346 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 MAP3K7O43318 606 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 FOXS1O43638 330 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 FKBP9O95302 570 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 STATHP02808 62 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 RNF224P0DH78 156 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 MPC1LP0DKB6 136 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 IMPA1P29218 277 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 FOLR3P41439 243 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 PNLIPRP1P54315 467 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 ARF3P61204 181 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 MRPS25P82663 173 aaKnown RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 SARNPP82979 210 aaKnown RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 PRDX1Q06830 199 aaKnown RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 THOC5Q13769 683 aaKnown RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 LONRF1Q17RB8 773 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 HKDC1Q2TB90 917 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 PLEKHN1Q494U1 663 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 HP1BP3Q5SSJ5 553 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 SLC6A19Q695T7 634 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 JMJD6Q6NYC1 403 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-205ENST00000394892 NEK10Q6ZWH5 1172 aa8.45□□□□□ -1.06
ATG4A-205ENST00000394892 MED25Q71SY5 747 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms