RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 RDH14Q9HBH5 336 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 PLGRKTQ9HBL7 147 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 FZD3Q9NPG1 666 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TM7SF3Q9NS93 570 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 OPTCQ9UBM4 332 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 ANGPTL3Q9Y5C1 460 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 KIAA1549LQ6ZVL6 1849 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TICRRQ7Z2Z1 1910 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TCRBV21S2A2A0A5A6 115 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 KANSL1LA0AUZ9 987 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SLC5A10A0PJK1 596 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 PABPN1LA6NDY0 278 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 ARHGEF33A8MVX0 844 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 MEI4A8MW99 385 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 EIF3FO00303 357 aaPredicted RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 PLRG1O43660 514 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 VEGFDO43915 354 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 RNGTTO60942 597 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 E2F6O75461 281 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 STK16O75716 305 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 C8BP07358 591 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 C8GP07360 202 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 MPC1LP0DKB6 136 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 MAP4P27816 1152 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 ADSLP30566 484 aaPredicted RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 PIK3CGP48736 1102 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 CDK9P50750 372 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 AQP4P55087 323 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 RPS21P63220 83 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 KLF10Q13118 480 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 CBX3Q13185 183 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 CCINQ13939 588 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 CCNIQ14094 377 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 DOC2BQ14184 412 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 GRB7Q14451 532 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 NFE2L1Q14494 772 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 IRF4Q15306 451 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TEAD4Q15561 434 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SMAD2Q15796 467 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 ADAMTSL4Q6UY14 1074 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 RBM44Q6ZP01 1051 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 TRMT11Q7Z4G4 463 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 TICAM1Q8IUC6 712 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 PQLC1Q8N2U9 271 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 OR4F6Q8NGB9 312 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 METTL6Q8TCB7 284 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 MCOLN3Q8TDD5 553 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TUBGCP3Q96CW5 907 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 COX14Q96I36 57 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 ZNF382Q96SR6 550 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SERPINI1Q99574 410 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SLX1AQ9BQ83 275 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SLC17A9Q9BYT1 436 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 AKTIPQ9H8T0 292 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 PALMDQ9NP74 551 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 SLC23A2Q9UGH3 650 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 TMED5Q9Y3A6 229 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 DTNAQ9Y4J8 743 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 PCDHGA11Q9Y5H2 935 aa6.75□□□□□ -1.33
RTN4-205ENST00000394609 COPG1Q9Y678 874 aaKnown RBP6.75□□□□□ -1.33
RTN4-205ENST00000394609 NUMA1Q14980 2115 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 ANKRD12Q6UB98 2062 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 PIKFYVEQ9Y2I7 2098 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 LOC730098B7Z3J9 87 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 K7EPI3 171 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 FFAR3O14843 346 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 SCAMP1O15126 338 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 UBDO15205 165 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 GPR42O15529 346 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 DNAJA2O60884 412 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 MATN4O95460 622 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 CAPN1P07384 714 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 HNRNPCP07910 306 aaKnown RBP eCLIP6.74□□□□□ -1.33
RTN4-205ENST00000394609 FAM58BPP0C7Q3 252 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 UROSP10746 265 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 ACADMP11310 421 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 IL9P15248 144 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 FOSL2P15408 326 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 ZNF12P17014 697 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 ZNF23P17027 643 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 CDH2P19022 906 aaPredicted RBP6.74□□□□□ -1.33
RTN4-205ENST00000394609 CYP2A7P20853 494 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 PIK3R1P27986 724 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 ACSL1P33121 698 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 BDKRB1P46663 353 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 MTTPP55157 894 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 NME5P56597 212 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 PPP2CBP62714 309 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 PPP2CAP67775 309 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 MLLT1Q03111 559 aaPredicted RBP6.74□□□□□ -1.33
RTN4-205ENST00000394609 TDGQ13569 410 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 PTCHD3Q3KNS1 767 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 NADK2Q4G0N4 442 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 ZNF658BQ4V348 819 aaPredicted RBP6.74□□□□□ -1.33
RTN4-205ENST00000394609 BCL7AQ4VC05 210 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 SGO1Q5FBB7 561 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 IRAK1BP1Q5VVH5 260 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 XKR5Q6UX68 686 aa6.74□□□□□ -1.33
RTN4-205ENST00000394609 FAM83HQ6ZRV2 1179 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms