RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 CDKL4Q5MAI5 379 aa13.85□□□□□ -0.19
RNF41-202ENST00000394013 NOXRED1Q6NXP6 359 aa13.85□□□□□ -0.19
RNF41-202ENST00000394013 BIRC7Q96CA5 298 aa13.85□□□□□ -0.19
RNF41-202ENST00000394013 CCDC138Q96M89 665 aa13.85□□□□□ -0.19
RNF41-202ENST00000394013 CENPKQ9BS16 269 aa13.85□□□□□ -0.19
RNF41-202ENST00000394013 ZDHHC5Q9C0B5 715 aa13.85□□□□□ -0.19
RNF41-202ENST00000394013 MRPL40Q9NQ50 206 aaKnown RBP13.85□□□□□ -0.19
RNF41-202ENST00000394013 CCM2LQ9NUG4 571 aaPredicted RBP13.85□□□□□ -0.19
RNF41-202ENST00000394013 MSRAQ9UJ68 235 aa13.85□□□□□ -0.19
RNF41-202ENST00000394013 ZFR2Q9UPR6 939 aaKnown RBP13.85□□□□□ -0.19
RNF41-202ENST00000394013 TDRKHQ9Y2W6 561 aaKnown RBP13.85□□□□□ -0.19
RNF41-202ENST00000394013 LAMA1P25391 3075 aa13.85□□□□□ -0.19
RNF41-202ENST00000394013 PRAMEF33A0A0G2JMD5 474 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 NPPBP16860 134 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 PRKCQQ04759 706 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 FOXM1Q08050 763 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 MED21Q13503 144 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 PDK3Q15120 406 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 GLYATQ6IB77 296 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 PNCKQ6P2M8 343 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 OR56A3Q8NH54 315 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 HIC2Q96JB3 615 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 DZANK1Q9NVP4 752 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.84□□□□□ -0.19
RNF41-202ENST00000394013 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.84□□□□□ -0.19
RNF41-202ENST00000394013 C1QTNF3-AMACRE9PGA6 284 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 KCNH1O95259 989 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 GRIA2P42262 883 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 CDK3Q00526 305 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 CKAP5Q14008 2032 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 NKG7Q16617 165 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 BCL7AQ4VC05 210 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 ATAT1Q5SQI0 421 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 FOXB2Q5VYV0 432 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 OR52E8Q6IFG1 317 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 FAM180BQ6P0A1 224 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 METTL2BQ6P1Q9 378 aaKnown RBP13.84□□□□□ -0.19
RNF41-202ENST00000394013 GCNT7Q6ZNI0 430 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 DENND4AQ7Z401 1863 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 GALNT10Q86SR1 603 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 CLECL1Q8IZS7 167 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 OR7G3Q8NG95 312 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 HUS1BQ8NHY5 278 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 FIG4Q92562 907 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 ZUFSPQ96AP4 578 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 ZBTB18Q99592 522 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 S1PR5Q9H228 398 aa13.84□□□□□ -0.19
RNF41-202ENST00000394013 MYCLP1P12525 358 aaPredicted RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 COL9A1P20849 921 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 PSMB5P28074 263 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 ACADLP28330 430 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 RPS13P62277 151 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 RAE1P78406 368 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 TFF2Q03403 129 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 DPTQ07507 201 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 PPP1R8Q12972 351 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 ITPRIPL2Q3MIP1 535 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 ENPP6Q6UWR7 440 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 SLCO4C1Q6ZQN7 724 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 FAM124AQ86V42 546 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 C1orf52Q8N6N3 182 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 ADCY4Q8NFM4 1077 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 PNPT1Q8TCS8 783 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 GANCQ8TET4 914 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 TRMT61BQ9BVS5 477 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 SORBS1Q9BX66 1292 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 HDAC8Q9BY41 377 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 PAIP1Q9H074 479 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 VCX3BQ9H321 246 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 SOX17Q9H6I2 414 aaPredicted RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 OBP2AQ9NY56 170 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 ASF1AQ9Y294 204 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 MAGED1Q9Y5V3 778 aaPredicted RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 PLXND1Q9Y4D7 1925 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 CAPNS1P04632 268 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 APODP05090 189 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 PTPN6P29350 595 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 KIR2DL1P43626 348 aaPredicted RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 CASP9P55211 416 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 CLDN8P56748 225 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 EEFSECP57772 596 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 TAP2Q03519 686 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 CYP4F3Q08477 520 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 BNIP2Q12982 314 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 IRF4Q15306 451 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 UGT8Q16880 541 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 UGT2A3Q6UWM9 527 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 ERMP1Q7Z2K6 904 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 PTRH1Q86Y79 214 aaKnown RBP13.83□□□□□ -0.2
RNF41-202ENST00000394013 FAM20CQ8IXL6 584 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 CMTM7Q96FZ5 175 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 FOPNLQ96NB1 174 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 OR52A5Q9H2C5 316 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 CXorf56Q9H5V9 222 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 CLDND1Q9NY35 253 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 CA5BQ9Y2D0 317 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 WDR37Q9Y2I8 494 aa13.83□□□□□ -0.2
RNF41-202ENST00000394013 MYO10Q9HD67 2058 aa13.82□□□□□ -0.2
RNF41-202ENST00000394013 TGFB1P01137 390 aa13.82□□□□□ -0.2
RNF41-202ENST00000394013 MRPS35P82673 323 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms