RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 CCDC74AQ96AQ1 378 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 THAP11Q96EK4 314 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 C7orf26Q96N11 449 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 TMEM237Q96Q45 408 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 GFM1Q96RP9 751 aaKnown RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 GATA5Q9BWX5 397 aaPredicted RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 PITPNM3Q9BZ71 974 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 SLC29A3Q9BZD2 475 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 ELOVL6Q9H5J4 265 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 XKR8Q9H6D3 395 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 SYNDIG1Q9H7V2 258 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 NOL11Q9H8H0 719 aaKnown RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 FANCEQ9HB96 536 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 MID1IP1Q9NPA3 183 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 SEMA4BQ9NPR2 832 aaPredicted RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 FSCN3Q9NQT6 498 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 C1GALT1Q9NS00 363 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 MRGBPQ9NV56 204 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 TMEM184CQ9NVA4 438 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 ACTR10Q9NZ32 417 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 VTI1BQ9UEU0 232 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 PCTPQ9UKL6 214 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 PLAGL1Q9UM63 463 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 RAP2CQ9Y3L5 183 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 PCDHGA11Q9Y5H2 935 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 PCDHGA1Q9Y5H4 931 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 RNF215Q9Y6U7 377 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 FANCMQ8IYD8 2048 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 IGHV1OR21-1A0A087WYE8 117 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 ANKDD1BA6NHY2 528 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 TRPC5OSA6NMA1 111 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 SRRM3A6NNA2 597 aaPredicted RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 E2F3O00716 465 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 SIX3O95343 332 aaPredicted RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 C1GALT1C1LP0DN25 315 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 UROSP10746 265 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 HGFP14210 728 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 EZRP15311 586 aaKnown RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 ACP1P24666 158 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 GMPRP36959 345 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 KCNC1P48547 511 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 RPL14P50914 215 aaKnown RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 RPS15AP62244 130 aaKnown RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 NHLH1Q02575 133 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 RELAQ04206 551 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 BST1Q10588 318 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 CHIT1Q13231 466 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 SQSTM1Q13501 440 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 TRA2AQ13595 282 aaKnown RBP eCLIP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 MPP2Q14168 576 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 GRB7Q14451 532 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 PROX2Q3B8N5 592 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 AMZ1Q400G9 498 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 CCSMST1Q4G0I0 132 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 GGTA1PQ4G0N0 100 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 STPG1Q5TH74 334 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 ATG9BQ674R7 924 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 MED27Q6P2C8 311 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 NXPE4Q6UWF7 544 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 SUSD1Q6UWL2 747 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 XKR5Q6UX68 686 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 MBOAT1Q6ZNC8 495 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 SPRED1Q7Z699 444 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 CPLX4Q7Z7G2 160 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 TMPRSS11BQ86T26 416 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 CUZD1Q86UP6 607 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 ADGRF3Q8IZF5 1079 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 CLYBLQ8N0X4 340 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 Q8N9G6 341 aaPredicted RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 OR2L3Q8NG85 312 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 OR2I1PQ8NGU4 316 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 IFI44Q8TCB0 444 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 METTL6Q8TCB7 284 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 TRPC4APQ8TEL6 797 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 ZNF483Q8TF39 744 aaPredicted RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 RERGQ96A58 199 aaPredicted RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 PYCR2Q96C36 320 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 CHMP6Q96FZ7 201 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 TMEM74Q96NL1 305 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 IL17FQ96PD4 163 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 CCDC3Q9BQI4 270 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 TMEM79Q9BSE2 394 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 MECRQ9BV79 373 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 NTMT1Q9BV86 223 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 ACAT2Q9BWD1 397 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 STRADBQ9C0K7 418 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 C12orf65Q9H3J6 166 aaKnown RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 LRRN3Q9H3W5 708 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 CCDC134Q9H6E4 229 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 RIC8BQ9NVN3 520 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 SOHLH2Q9NX45 425 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 TRPS1Q9UHF7 1281 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 IKZF3Q9UKT9 509 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 POMT2Q9UKY4 750 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 CDV3Q9UKY7 258 aaKnown RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 APOBEC2Q9Y235 224 aaKnown RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 A0A088AWK7 358 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 GOLGA8QA0A0J9YX86 632 aa3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.41□□□□□ -1.86
ATP2B1-203ENST00000393164 GOLGA8OA6NCC3 632 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms