RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SQLEQ14534 574 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 PPP1R3AQ16821 1122 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 FNDC3BQ53EP0 1204 aaKnown RBP18.48■□□□□ 0.55
CCDC50-202ENST00000392456 Q5BKY6 102 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 GTF2IRD2BQ6EKJ0 949 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 TPRG1Q6ZUI0 275 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 GTF2IRD2Q86UP8 949 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 STK40Q8N2I9 435 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 CPA6Q8N4T0 437 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 PIWIL2Q8TC59 973 aaKnown RBP18.48■□□□□ 0.55
CCDC50-202ENST00000392456 SECISBP2Q96T21 854 aaKnown RBP18.48■□□□□ 0.55
CCDC50-202ENST00000392456 TRMT61BQ9BVS5 477 aaKnown RBP18.48■□□□□ 0.55
CCDC50-202ENST00000392456 NMRAL1Q9HBL8 299 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 FBXO8Q9NRD0 319 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 IL36AQ9UHA7 158 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 PCDHGA10Q9Y5H3 936 aa18.48■□□□□ 0.55
CCDC50-202ENST00000392456 G3V2L1 256 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 PLK4O00444 970 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 TIMP2P16035 220 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 ST8SIA6P61647 398 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 SETMARQ53H47 684 aaPredicted RBP18.47■□□□□ 0.55
CCDC50-202ENST00000392456 C9orf64Q5T6V5 341 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 AGAP6Q5VW22 663 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 HID1Q8IV36 788 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 FSTL5Q8N475 847 aaPredicted RBP18.47■□□□□ 0.55
CCDC50-202ENST00000392456 LRRC20Q8TCA0 184 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 HEXDCQ8WVB3 486 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 AGAP4Q96P64 663 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 ASB2Q96Q27 587 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 ABCG8Q9H221 673 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 ERVMER34-1Q9H9K5 563 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 DNAJC28Q9NX36 388 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 MRPL39Q9NYK5 338 aaKnown RBP18.47■□□□□ 0.55
CCDC50-202ENST00000392456 COPG2Q9UBF2 871 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 YKT6O15498 198 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 SRP72O76094 671 aaKnown RBP18.47■□□□□ 0.55
CCDC50-202ENST00000392456 PRAMEF1O95521 474 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 SPNP16150 400 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 IMPDH1P20839 514 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 MSX2P35548 267 aaPredicted RBP18.47■□□□□ 0.55
CCDC50-202ENST00000392456 TALDO1P37837 337 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 SLC12A2P55011 1212 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 BNIP2Q12982 314 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 CSHL1Q14406 222 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 TOR2AQ5JU69 321 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 CORO6Q6QEF8 472 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 INTS12Q96CB8 462 aaKnown RBP18.47■□□□□ 0.55
CCDC50-202ENST00000392456 MAGED4Q96JG8 741 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 PAQR5Q9NXK6 330 aaPredicted RBP18.47■□□□□ 0.55
CCDC50-202ENST00000392456 NPAP1Q9NZP6 1156 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 GMEB2Q9UKD1 530 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 DIMT1Q9UNQ2 313 aaKnown RBP18.47■□□□□ 0.55
CCDC50-202ENST00000392456 COLQQ9Y215 455 aaPredicted RBP18.47■□□□□ 0.55
CCDC50-202ENST00000392456 FAM50BQ9Y247 325 aa18.47■□□□□ 0.55
CCDC50-202ENST00000392456 SOX1O00570 391 aaPredicted RBP18.46■□□□□ 0.55
CCDC50-202ENST00000392456 CTDSP2O14595 271 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 NDUFS3O75489 264 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 KAT7O95251 611 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 ARRB2P32121 409 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 IL12RB1P42701 662 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 ILF2Q12905 390 aaKnown RBP18.46■□□□□ 0.55
CCDC50-202ENST00000392456 USP45Q70EL2 814 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 BOCQ9BWV1 1114 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 TMEM245Q9H330 911 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 ACOXLQ9NUZ1 547 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 CACNA2D2Q9NY47 1150 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 CD84Q9UIB8 345 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 IQCF5A8MTL0 148 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 WISP3O95389 354 aaPredicted RBP18.46■□□□□ 0.55
CCDC50-202ENST00000392456 DLGAP3O95886 979 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 FGF3P11487 239 aaPredicted RBP18.46■□□□□ 0.55
CCDC50-202ENST00000392456 MTHFRP42898 656 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 VASPP50552 380 aaPredicted RBP18.46■□□□□ 0.55
CCDC50-202ENST00000392456 CHRNA6Q15825 494 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 ZNF438Q7Z4V0 828 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 LYSMD2Q8IV50 215 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 FLCNQ8NFG4 579 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 BPIFB6Q8NFQ5 453 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 LRTOMTQ8WZ04 291 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 SLC30A3Q99726 388 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 AARSD1Q9BTE6 412 aaKnown RBP18.46■□□□□ 0.55
CCDC50-202ENST00000392456 SMOXQ9NWM0 555 aa18.46■□□□□ 0.55
CCDC50-202ENST00000392456 LINC01387J3KSC0 135 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 TOR1AO14656 332 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 C1SP09871 688 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 FDXRP22570 491 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 POLR2IP36954 125 aaKnown RBP18.45■□□□□ 0.54
CCDC50-202ENST00000392456 HNRNPA1L2Q32P51 320 aaKnown RBP18.45■□□□□ 0.54
CCDC50-202ENST00000392456 MTX3Q5HYI7 312 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 DESI1Q6ICB0 168 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 EID3Q8N140 333 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 ATP6V1E2Q96A05 226 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 UBXN10Q96LJ8 280 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 FAM129BQ96TA1 746 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 ASB8Q9H765 288 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 FANCFQ9NPI8 374 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 INTS10Q9NVR2 710 aaKnown RBP18.45■□□□□ 0.54
CCDC50-202ENST00000392456 TAS2R7Q9NYW3 318 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 CPNE7Q9UBL6 633 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 C16orf96A6NNT2 1141 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms