RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 NSUN3Q9H649 340 aaKnown RBP16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CACYBPQ9HB71 228 aaKnown RBP16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FKBP14Q9NWM8 211 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ABCG2Q9UNQ0 655 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PCDHGC4Q9Y5F7 938 aa16.57■□□□□ 0.24
TRAF3IP1-202ENST00000391993 COL18A1P39060 1754 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PKMP14618 531 aaKnown RBP16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CD1DP15813 335 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SMSP52788 366 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ATP12AP54707 1039 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 OTUB1Q96FW1 271 aaPredicted RBP16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 COL21A1Q96P44 957 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FEVQ99581 238 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 GPR45Q9Y5Y3 372 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 KCNE2Q9Y6J6 123 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PRR23AA6NEV1 266 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 NT5C1B-RDH14C9J2C7 533 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MATN3O15232 486 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FPR1P21462 350 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PCSK1P29120 753 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ACSM2AQ08AH3 577 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 EFR3AQ14156 821 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 TATDN3Q17R31 274 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DPY19L1Q2PZI1 675 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ACSM2BQ68CK6 577 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CXorf57Q6NSI4 855 aaKnown RBP16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SLC27A1Q6PCB7 646 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CEP68Q76N32 757 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PRSS48Q7RTY5 328 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 BEND7Q8N7W2 519 aaPredicted RBP16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MED8Q96G25 268 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 TUBB1Q9H4B7 451 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ANKRA2Q9H9E1 313 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MIOSQ9NXC5 875 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ZIM2Q9NZV7 527 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MAPRE3Q9UPY8 281 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 LOC102723532A0A0G2JNH3 316 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FAM220BPB1ANY3 271 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DCLK1O15075 740 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 IQCF3P0C7M6 154 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 AP2S1P53680 142 aaPredicted RBP16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 UGT2B15P54855 530 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 BCL2L1Q07817 233 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 RCAN2Q14206 197 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 NADSYN1Q6IA69 706 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ADGRD2Q7Z7M1 963 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DNAJB3Q8WWF6 145 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ST8SIA2Q92186 375 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DNASE1L2Q92874 299 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FCRL5Q96RD9 977 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 TVP23BQ9NYZ1 205 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 H2AFY2Q9P0M6 372 aaPredicted RBP16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PTGFRNQ9P2B2 879 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 STOML2Q9UJZ1 356 aa16.56■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CLIC1O00299 241 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 RPS7P62081 194 aaKnown RBP16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ANKRD54Q6NXT1 300 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 TMEM179BQ7Z7N9 219 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 GLCCI1Q86VQ1 547 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CCDC117Q8IWD4 279 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 NLGN4XQ8N0W4 816 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PROKR1Q8TCW9 393 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 HMCESQ96FZ2 354 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 POLR1EQ9GZS1 481 aaKnown RBP16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PDLIM7Q9NR12 457 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 RIMKLBQ9ULI2 386 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ZFC3H1O60293 1989 aaKnown RBP16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 A0A1W2PQL4 384 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SEPT4O43236 478 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SERPIND1P05546 499 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ENGP17813 658 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PNPLA4P41247 253 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ATP4BP51164 291 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MAD2L1BPQ15013 274 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ABRAXAS2Q15018 415 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 RDH12Q96NR8 316 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 NPY6RQ99463 290 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 NARFLQ9H6Q4 476 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ARHGEF15O94989 841 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MAZP56270 477 aaKnown RBP16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 FAM205BPQ63HN1 556 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DEF8Q6ZN54 512 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 ATG10Q9H0Y0 220 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CXCL16Q9H2A7 254 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 RNF121Q9H920 327 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 STARD7Q9NQZ5 370 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 NANSQ9NR45 359 aa16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 PRG3Q9Y2Y8 225 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP1-202ENST00000391993 METTL15A6NJ78 407 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SLC7A4O43246 635 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 SGTAO43765 313 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 MAP2K3P46734 347 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DAOAP59103 153 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 GALK2Q01415 458 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 COMMD7Q86VX2 200 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 DENND1CQ8IV53 801 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 THEM5Q8N1Q8 247 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 Q8N402 240 aa16.54■□□□□ 0.24
TRAF3IP1-202ENST00000391993 CLDN19Q8N6F1 224 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms