RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 HRH2P25021 359 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 PSMB5P28074 263 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 IMPA1P29218 277 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 STX2P32856 288 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 CCR10P46092 362 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 CYP4F2P78329 520 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 RELAQ04206 551 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 PRDX1Q06830 199 aaKnown RBP12.16□□□□□ -0.46
GGPS1-203ENST00000391855 FASTKQ14296 549 aaKnown RBP12.16□□□□□ -0.46
GGPS1-203ENST00000391855 PRAMEF17Q5VTA0 474 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 ICE2Q659A1 982 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 ZNF385CQ66K41 422 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-203ENST00000391855 C16orf46Q6P387 395 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 FAM198BQ6UWH4 519 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 ZDHHC24Q6UX98 284 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 CTAGE6Q86UF2 777 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 CTAGE4Q8IX94 777 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 MMGT1Q8N4V1 131 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 NKAPQ8N5F7 415 aaKnown RBP12.16□□□□□ -0.46
GGPS1-203ENST00000391855 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 ANKRD7Q92527 254 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 EXTL1Q92935 676 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 RNF31Q96EP0 1072 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 TSPAN17Q96FV3 270 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 CPNE1Q99829 537 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 ZFYVE21Q9BQ24 234 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 SELENOSQ9BQE4 189 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 TSPYL1Q9H0U9 437 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 ACTL8Q9H568 366 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 TUBD1Q9UJT1 453 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 CACNA1GO43497 2377 aa12.16□□□□□ -0.46
GGPS1-203ENST00000391855 ZFHX4Q86UP3 3567 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 TCRBV9S1A1TA0A576 114 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 KRT87PA6NCN2 255 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 HCRTR1O43613 425 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 TSPAN12O95859 305 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 PIM1P11309 404 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 ZNF37AP17032 561 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 SSTR1P30872 391 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 GCGRP47871 477 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 SLC12A2P55011 1212 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 DCDP81605 110 aaKnown RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 NAB1Q13506 487 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 TSTA3Q13630 321 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 NCF4Q15080 339 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 UGT8Q16880 541 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 FAM214AQ32MH5 1076 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 LINC00303Q3SY05 128 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 GLE1Q53GS7 698 aaKnown RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 FAM199XQ6PEV8 388 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 SUSD1Q6UWL2 747 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 CAPN12Q6ZSI9 719 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 CCDC25Q86WR0 208 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 LRRC56Q8IYG6 542 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 ZNF655Q8N720 491 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 APOBEC4Q8WW27 367 aaKnown RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 ATL1Q8WXF7 558 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 THAP4Q8WY91 577 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 GBP5Q96PP8 586 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 OLFM1Q99784 485 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 PLCD4Q9BRC7 762 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 DPH7Q9BTV6 452 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 ACAT2Q9BWD1 397 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 SPRTNQ9H040 489 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 SLC6A20Q9NP91 592 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 STOX2Q9P2F5 926 aaPredicted RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 MTRF1LQ9UGC7 380 aaKnown RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 TAC3Q9UHF0 121 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 SNX7Q9UNH6 387 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 NOVA2Q9UNW9 492 aaKnown RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 PDE10AQ9Y233 779 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 KLHL20Q9Y2M5 609 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 PSAT1Q9Y617 370 aa12.15□□□□□ -0.46
GGPS1-203ENST00000391855 MRPS18BQ9Y676 258 aaKnown RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 SNRNP200O75643 2136 aaKnown RBP12.15□□□□□ -0.46
GGPS1-203ENST00000391855 A0A1B0GX78 115 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 FITM1A5D6W6 292 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 FAM159BA6NKW6 160 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 EZRP15311 586 aaKnown RBP12.14□□□□□ -0.47
GGPS1-203ENST00000391855 GP5P40197 560 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 MAGEA4P43358 317 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 EMP3P54852 163 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 TBPL1P62380 186 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 POU4F1Q01851 419 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 ERV3-1Q14264 604 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 PTCHD3Q3KNS1 767 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 THEMIS2Q5TEJ8 643 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 PRAMEF13Q5VWM6 474 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 ZNF425Q6IV72 752 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 AGTRAPQ6RW13 159 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 C3orf62Q6ZUJ4 267 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 PAQR7Q86WK9 346 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 ENDOVQ8N8Q3 282 aaKnown RBP12.14□□□□□ -0.47
GGPS1-203ENST00000391855 FKBP10Q96AY3 582 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 MCMBPQ9BTE3 642 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 LRRC1Q9BTT6 524 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 AKIRIN1Q9H9L7 192 aaPredicted RBP12.14□□□□□ -0.47
GGPS1-203ENST00000391855 GEMIN8Q9NWZ8 242 aaKnown RBP12.14□□□□□ -0.47
GGPS1-203ENST00000391855 GPN3Q9UHW5 284 aaPredicted RBP12.14□□□□□ -0.47
GGPS1-203ENST00000391855 ADAMTS6Q9UKP5 1117 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms